regPipe
> Step 1: masking skullbase
Time: Sat Aug 27 07:17:47 2011
1. Read Image
2. Change Labels
- labellist_0 :
- labellist_1 :
- inputimage : Read Image from Postsurgery segmentation
3. Read Image
4. Operation filter
- image1 : Image after changing labels
- image2 : Read Image from Postsurgery image
- image1constant : 0
- image2constant : 0
- constant1 : 0
- constant2 : 0
- multiply : 1
- substract : 0
- or : 0
- add : 0
5. Save Image
- suffix : -mask
- addtostack : 1
- newstack : 4
- inputimage : Image after operation
- format : 0
> Step 2: Reg Seg Post to Preop
Time: Sat Aug 27 07:17:51 2011
1. RView - Affine registration
- classic : 1
- sourceastarget : 0
- sourceassource : 0
- interpolation : 2
- compute : 1
- apply : 0
- anotherdof : 0
- usedofin : 0
- source : 4
- target : 1
- dofstack : 5
- outputstack : 5
- anotherdofstack : 1
- transform : 0
- dofin : 1
- dofsuffix : -reg.dof
- imagesuffix : -reg
2. RView - Affine registration
- classic : 1
- sourceastarget : 0
- sourceassource : 0
- interpolation : 0
- compute : 0
- apply : 1
- anotherdof : 1
- usedofin : 0
- source : 2
- target : 1
- dofstack : 1
- outputstack : 7
- anotherdofstack : 5
- transform : 0
- dofin : 1
- dofsuffix : -reg.dof
- imagesuffix : -reg
3. RView - Affine registration
- classic : 1
- sourceastarget : 0
- sourceassource : 0
- interpolation : 0
- compute : 0
- apply : 1
- anotherdof : 1
- usedofin : 0
- source : 3
- target : 1
- dofstack : 1
- outputstack : 6
- anotherdofstack : 5
- transform : 0
- dofin : 1
- dofsuffix : -reg.dof
- imagesuffix : -reg
> Step 3: relabel all to 1 postsurgery
Time: Sat Aug 27 07:30:06 2011
1. Read Image
2. Change Labels
- labellist_0 :
- labellist_1 :
- inputimage : Read Image from Presurgery segmentation
3. Save Image
- suffix : -red
- addtostack : 1
- newstack : 10
- inputimage : Image after changing labels
- format : 0
> Step 4: relabel all to 1 presurgery
Time: Sat Aug 27 07:30:09 2011
1. Read Image
2. Change Labels
- labellist_0 :
- labellist_1 :
- inputimage : Read Image from Presurgery segmentation
3. Save Image
- suffix : -red
- addtostack : 1
- newstack : 10
- inputimage : Image after changing labels
- format : 0
> Step 5: Pipeline successfully finished !
Time: Sat Aug 27 07:30:13 2011