View source for Slicer-4.1

Target date for the code freeze is Monday. Feb. 27, 2012

=Features and Responsibilities=
*Dicom widget: Steve
**cget
**pop up reorganization
**Lollipop
*Charts: Jim
**Label statistics
*compareviews and linking: Jim
**bugs 1526, 1598, 1495, 1583, 1607, 1632, 1631, 1686 (or a subset)
*VTK GPU raycaster: J2
**linear ramp, crash in transfer function editor
* View controller cosmetics: J2
**[[2012_Project_Week:ViewerControls|Redesign drafts]]
** Please consider notes here (not captured on the project wiki page, but we agreed on this redesign I think): [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.0/SlicerApplication/MouseandKeyboardShortcuts#Proposed_functionality]
*Brainsfit cosmetics: Hans
**[http://na-mic.org/Mantis/view.php?id=1584 feature request]
*Extensions: JC
** Refine the mechanism to build/test/upload extensions.
** Provide support to extension developers so that the following extensions are built:
*** ABC, SkullStripper, EMSegmenter, VMTK, Plastimatch, DVH/SlicerRt 
*Documentation: JC
** Mechanism to easily "version" the documentation. (Easy creation of set of pages associated to release 4.1 from the pages prefixed with 4.0)
** NiceToHave:
*** Offline documentation: Mobile skin for webkit rendering of the slicer wiki documentation pages
* PythonQt: JC
** Update CTK and Slicer to consider the contributed change to PythonQt
* Fix for texture resolution: Alex
* Update screen capture to reflect all possible layouts - Nicole
* Annotation module bugs: scrolling, deleting, import, ruler, storage nodes - Nicole

=Bug fixes targeted for this release=
Sonia's reports on the DTI modules of the current Slicer4 release:

* Mantis Bug Reports:
** [http://www.na-mic.org/Bug/view.php?id=1722 Brain Mask] (assigned to Demian)
** [http://www.na-mic.org/Bug/view.php?id=1679 Color by Orientation] (assigned to Demian)
** [http://www.na-mic.org/Bug/view.php?id=1678 Glyphs Visualization] (assigned to Alex)
**[http://www.na-mic.org/Bug/view.php?id=1685 Fiducials Seeding ] (assigned to Alex)
** [http://www.na-mic.org/Bug/view.php?id=1684 Consistency of the GUI in the labelmap and fiducial seeding modules] (assigned to Alex)
** [http://www.na-mic.org/Bug/view.php?id=1724 Scalar Measurement computation issue (Planar measure)] : wrong window and level values in the Volumes module ( assigned to Julien Finet)  iss due to extreme values in the data - can this be clamped in the scalar estimation module?
** [http://www.na-mic.org/Bug/view.php?id=1725 Scalar measurement update issue]]

* Suggested Reorganization of the Diffusion menu (assigned to Demian)
**Diffusion Data Conversion: 
***DICOM to Nrrd
***DTIimport/export
** DWI: 
***Brain Mask
***Tensor Estimation
*** Denoising
** DTI
*** Scalar Measurements
*** Tractography
*** Resample

* 'DicomToNrrdConverter' should be 'DICOM To NRRD Converter', and make the parameters of the Output sections visible on the GUI (assigned to Demian)

* Use new Slicer4 QTtesting functionalities for cross-platform testing of Iowa Workshop tutorials

= Open Questions =
* Is it realistic to try for SimpleITK in this release?  (After discussion: no, needs more testing - aim for summer project week)
** Yes, if somebody can help with ITK 4 on windows.
** linux packaging issue:
*** (2) itkXXX.so files are missing in the Slicer package.
** linux discovering CLI: 
*** (1) missing symbol on exit of CLI; in addition with a Qt bug, it fails to parse the CLI XML description
** possibly other issues on window (needs testing)
*** (3) Building SWIG for SimpleITK is the problem.
** need to try all the packaging platforms
*** packaging has never been tried on mac (J2 didn't try to compile on Mac neither)
*** packaging has never been tried on windows (because it doesn't compile)

{| style="margin: 1em auto 1em auto; border: 1px solid darkgray;"
|-
! 
! scope="col" colspan="3" style="border-bottom: 1px solid grey;"| Build
! scope="col" colspan="3" style="border-bottom: 1px solid grey;"| Run
! scope="col" colspan="3" style="border-bottom: 1px solid grey;"| Package
|-
!Type
!Windows
!Linux
!Mac
!Windows
!Linux
!Mac
!Windows
!Linux
!Mac
|-
| ITKv4
|bgcolor="Orange" align="center"|?
|bgcolor="LightGreen" align="center"|ok
|bgcolor="Orange" align="center"|?
|bgcolor="Orange" align="center"|?
|bgcolor="#f34a33" align="center"|no (1)
|bgcolor="Orange" align="center"|?
|bgcolor="Orange" align="center"|?
|bgcolor="#f34a33" align="center"|no (2)
|bgcolor="Orange" align="center"|?
|-
| SimpleITK
|bgcolor="#f34a33" align="center"| no (3)
|bgcolor="LightGreen" align="center"|ok
|bgcolor="Orange" align="center"|?
|bgcolor="Orange" align="center"|?
|bgcolor="#f34a33" align="center"|no (1)
|bgcolor="Orange" align="center"|?
|bgcolor="Orange" align="center"|?
|bgcolor="#f34a33" align="center"|no (2)
|bgcolor="Orange" align="center"|?
|}
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