View source for Projects:ARRA:SlicerWF:PETCTWorkflow

*[[Projects:ARRA:SlicerWF:PETCTWorkflowDesign| PETCT Workflow Design Page]]

* 2011-03 Change Requests:<br>
1) Segment and compute tumor volume for contrast-enhanced MRI scans. [Will provide with instructions for threshold based segmentation and include MRML Scene load to GUI]
 

* 2011-02 Change Requests:<br>
1) Add MRI (T1 , FLAIR) for aiding the VOI drawing <br> [done] <br>
2) Add labels for additional VOIs <br> [done] <br>
3) Compute SUVs for entire brain (will run on a separate label map devoted for ICC) <br> [pending] <br>
4) Segment MRI and compute brain parenchymal fraction <br> [in progress - separate EM Segmentation Workflow Module will be provided] <br>
5) Based on segmentation results in 4), compute SUVs for CSF and All White matter) <br>
6) Add total counts for a given VOI  <br> [pending] <br>
7) Generate denormalized Excel files out of unpivoted SUV outputs. User wants all labels <br>    to be listed as table headers. Make separate files for SUV Max, SUV Avg, SUV Total Counts <br>
[Done for SUV Max and SUV Avg] <br>