Difference between revisions of "2007 Core 1 Meeting"
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*** Discuss goals and agenda | *** Discuss goals and agenda | ||
** 9:00am Driving Biological problems '''[[2007_Core_1_Meeting_DBP_Guidlines|(Guidelines for talks)]]''' | ** 9:00am Driving Biological problems '''[[2007_Core_1_Meeting_DBP_Guidlines|(Guidelines for talks)]]''' | ||
| − | *** Marek Kubicki - Harvard/B&W | + | *** Marek Kubicki - Harvard/B&W '''[[Media:VCFS-Core1.ppt | Slides]]''' |
| − | *** Gabor Fichtinger - Johns Hopkins | + | *** Gabor Fichtinger - Johns Hopkins '''[[Media:Fichtinger-NAMIC-PI-May30.pdf | Slides]]''' |
*** (break) | *** (break) | ||
| − | *** H. Jeremy Bockholt - Mind Institute [[Media: | + | *** H. Jeremy Bockholt - Mind Institute '''[[Media:20070530_lupus_dbp_progress.pdf | Slides]]''' |
| − | *** Heather Cody Hazlett - UNC | + | *** Heather Cody Hazlett - UNC '''[[Media:namic_core1 may07_longitud aut study.ppt| slides]]''' |
**11:30pm Core 1 Coordinate Discussion | **11:30pm Core 1 Coordinate Discussion | ||
*** A preliminary discussion in preparation for agenda items on Thurs afternoon. For example --- software dissemination. | *** A preliminary discussion in preparation for agenda items on Thurs afternoon. For example --- software dissemination. | ||
| Line 16: | Line 16: | ||
** 1:00pm Invited Talk: Daniel Rueckert. "Quantification of brain development during early childhood using non-rigid registration". ([http://www.csail.mit.edu/events/eventcalendar/calendar.php?show=event&id=1484 talk announcement]) | ** 1:00pm Invited Talk: Daniel Rueckert. "Quantification of brain development during early childhood using non-rigid registration". ([http://www.csail.mit.edu/events/eventcalendar/calendar.php?show=event&id=1484 talk announcement]) | ||
** 2:00-4:30pm Core 1 presentations | ** 2:00-4:30pm Core 1 presentations | ||
| − | *** John Melonakos (Georgia Tech) - | + | *** John Melonakos (Georgia Tech) - "PDE methods for Image Segmentation and Shape Analysis: From the Brain to the Prostate and Back" '''[[Media:Segmentation.ppt| Slides]]''' |
*** Bruce Fischl (MGH) "Predicting architectonic boundaries from folding patterns" | *** Bruce Fischl (MGH) "Predicting architectonic boundaries from folding patterns" | ||
| − | *** Serdar Balci (MIT), "Group-wise registration in NAMIC-kit" | + | *** Serdar Balci (MIT), "Group-wise registration in NAMIC-kit" '''[[Media:SerdarBalci_MIT_GroupwiseRegistration.ppt | Slides]]''' |
*** Break | *** Break | ||
| − | *** Guido Gerig (UNC), "DTI atlas building with application to PNL SZ study (C. Goodlett)" | + | *** Guido Gerig (UNC), "DTI atlas building with application to PNL SZ study (C. Goodlett)" '''[[Media:UNC-DTI-Core1-Goodlett-May30.ppt | Slides]]''' |
| + | *** Not presented: Guido Gerig (UNC), "Cortical Thickness calculation based on 3D Distance Transform" '''[[Media:UNC-Cortex-Thick.ppt | Slides]]''' | ||
*** Tom Fletcher (Utah), "Volumetric Connectivity for analysis of DTI" | *** Tom Fletcher (Utah), "Volumetric Connectivity for analysis of DTI" | ||
** 4:30-6:00pm Break out sessions with DPBs | ** 4:30-6:00pm Break out sessions with DPBs | ||
| Line 26: | Line 27: | ||
** 8:30am Core 1 presentations | ** 8:30am Core 1 presentations | ||
*** Utah "Nonparametric Shape Modeling of Object Complexes" (Speaker TBD) | *** Utah "Nonparametric Shape Modeling of Object Complexes" (Speaker TBD) | ||
| − | *** Guido Gerig (UNC) "UNC Shape Analysis (M. Styner, I. Oguz)" / "Constructing Image Graphs for Lesion Segmention (M. Prastawa)" | + | *** Guido Gerig (UNC) "UNC Shape Analysis (M. Styner, I. Oguz)" '''[[Media: UNCShapeCore1_Styner_May30_07.ppt | Slides]]'''/ "Constructing Image Graphs for Lesion Segmention (M. Prastawa)" '''[[Media:NAMIC Core1-UNCPrastawa-lesiongraph-May30_07.ppt | Slides]]''' |
*** (break) | *** (break) | ||
| − | *** Mert Sabuncu (MIT), " | + | *** Mert Sabuncu (MIT), "Warp Regularization and Atlas Sharpness" '''[[Media:Mert_NamicTalk.ppt | Slides]]''' |
*** Gheorghe Postelnicu (MGH), "5D warping: integrating volume and surface information" | *** Gheorghe Postelnicu (MGH), "5D warping: integrating volume and surface information" | ||
| − | *** John Melonakos (Georgia Tech) - | + | *** John Melonakos (Georgia Tech) - "PDE methods for DWMRI Analysis and Image Registration" '''[[Media:TractographyRegistration.ppt| Slides]]''' |
** 12:30pm Lunch | ** 12:30pm Lunch | ||
** 1pm Strategic planning, software | ** 1pm Strategic planning, software | ||
*** Progress/interactions with DBPs | *** Progress/interactions with DBPs | ||
*** Software contributions and Core 2 interactions | *** Software contributions and Core 2 interactions | ||
| + | **** Jim Miller (GE Research), "Slicer3 Update", '''[[Media:SlicerUpdate5-2007.ppt | Slides]]''' | ||
*** Performance assessment and renewal | *** Performance assessment and renewal | ||
** 5pm Finish | ** 5pm Finish | ||
| Line 82: | Line 84: | ||
# Gheorghe Postelnicu (MGH) | # Gheorghe Postelnicu (MGH) | ||
# Bruce Fischl (MGH) | # Bruce Fischl (MGH) | ||
| + | # CF Westin (LMI) | ||
Latest revision as of 14:36, 18 June 2007
Home < 2007 Core 1 MeetingAgenda
- May 30 -
- 8:30am Remarks (Whitaker)
- Introductions
- Discuss goals and agenda
- 9:00am Driving Biological problems (Guidelines for talks)
- 11:30pm Core 1 Coordinate Discussion
- A preliminary discussion in preparation for agenda items on Thurs afternoon. For example --- software dissemination.
- 12:00pm Lunch
- 1:00pm Invited Talk: Daniel Rueckert. "Quantification of brain development during early childhood using non-rigid registration". (talk announcement)
- 2:00-4:30pm Core 1 presentations
- John Melonakos (Georgia Tech) - "PDE methods for Image Segmentation and Shape Analysis: From the Brain to the Prostate and Back" Slides
- Bruce Fischl (MGH) "Predicting architectonic boundaries from folding patterns"
- Serdar Balci (MIT), "Group-wise registration in NAMIC-kit" Slides
- Break
- Guido Gerig (UNC), "DTI atlas building with application to PNL SZ study (C. Goodlett)" Slides
- Not presented: Guido Gerig (UNC), "Cortical Thickness calculation based on 3D Distance Transform" Slides
- Tom Fletcher (Utah), "Volumetric Connectivity for analysis of DTI"
- 4:30-6:00pm Break out sessions with DPBs
- 8:30am Remarks (Whitaker)
- May 31
- 8:30am Core 1 presentations
- Utah "Nonparametric Shape Modeling of Object Complexes" (Speaker TBD)
- Guido Gerig (UNC) "UNC Shape Analysis (M. Styner, I. Oguz)" Slides/ "Constructing Image Graphs for Lesion Segmention (M. Prastawa)" Slides
- (break)
- Mert Sabuncu (MIT), "Warp Regularization and Atlas Sharpness" Slides
- Gheorghe Postelnicu (MGH), "5D warping: integrating volume and surface information"
- John Melonakos (Georgia Tech) - "PDE methods for DWMRI Analysis and Image Registration" Slides
- 12:30pm Lunch
- 1pm Strategic planning, software
- Progress/interactions with DBPs
- Software contributions and Core 2 interactions
- Jim Miller (GE Research), "Slicer3 Update", Slides
- Performance assessment and renewal
- 5pm Finish
- 8:30am Core 1 presentations
Logistics
Dates: May 30-31, 2007.
Please plan to travel on May 29, so that we can start in the morning of May 30. The meeting will be two full days; please plan to stay until 5pm on May31.
Location: MIT.
The meeting will take place in the Kiva conference room, on the 4th floor of Stata Center. We will post signs in the building, directing you to the conference room.
Food: Breakfast and lunch will be provided on May 30-31. We will also organize people into groups to go out for dinner on May 30. There are plenty of restaurants around Central Square and MIT.
Hotel: There is no official hotel for the meeting. Here is some information about Boston area hotels that are convenient to NA-MIC events: Boston_Hotels. Please book your rooms early.
Attendees
- Ross Whitaker (Utah)
- Polina Golland (MIT)
- Ron Kikinis (BWH)
- Guido Gerig(UNC)
- Heather Cody Hazlett (UNC Autism DBP)
- Allen Tannenbaum (Georgia Tech)
- John Melonakos (Georgia Tech)
- H. Jeremy Bockholt (MIND/UNM)
- Harvard Core 3: Marek Kubicki
- Mert R Sabuncu (MIT CSAIL)
- Lilla Zollei (NMR, MGH)
- Serdar K Balci (MIT CSAIL)
- Ulas Ziyan (MIT)
- Tom Fletcher (Utah)
- Josh Cates (Utah - tentative)
- Gabor Fichtinger (JHU)
- Jim Miller (GE Research)
- Dennis Jen (MGH)
- Sandy Wells (BWH, MIT)
- Marc Niethammer (BWH, Core 3)
- Wanmei Ou (MIT)
- Purang Abolmaesumi (Queen's)
- Steve Pieper (Isomics, Core 2)
- Peng Yu (HST/MIT)
- Gheorghe Postelnicu (MGH)
- Bruce Fischl (MGH)
- CF Westin (LMI)
