Difference between revisions of "Slicer3:XNAT"

Revision as of 21:06, 12 July 2007

Home < Slicer3:XNAT

Illustration of download process

Basic steps:

Browse to the desired image data set
Select Download Images
Pick which images you want
Select the filetype as "xar (3D Slicer)"
When the browser asks what to do with the file, select Slicer3 as the application (browse to where the program is installed).
Once downloaded, Slicer will look in the file and offer to load the images.

Options:

use the xnat installer script from Gabriele Fariello (fariello at fas.harvard.edu)
- this works for some linux distributions (Red Hat and probably Ubuntu)
- you must have Sun Java installed (not the gnu version)
- best to use this installer on a fresh machine
- apt-get of postgres may hang waiting for you to press 'Y'

Get the xnat webservices command line tools from http://www.xnat.org/tools.html#

ArcGet -host www.oasis-brains.org -u guest -p guest -s OAS1_0001_MR1

@@ Line 22: / Line 22: @@
 Options:
 * instructions on http://xnat.org
 * use the BIRN ROCKS installer (contact BIRN-CC via http://www.nbirn.net)
 * use the xnat installer script from Gabriele Fariello (fariello at fas.harvard.edu)
 ** this works for some linux distributions (Red Hat and probably Ubuntu)
 ** you must have Sun Java installed (not the gnu version)
 ** best to use this installer on a fresh machine
+** apt-get of postgres may hang waiting for you to press 'Y'
 == Tests ==