SanteFe.Tractography.Conference

Goals

We in NA-MIC, and our collaborating colleagues from BIRN, NAC and UIowa, are in a unique position to make a substanital contribution to the field of knowledge concerning the validation of medical image processing of Diffusion Tensor Image data. Among our faculty are leaders in the field of not only DTI analysis algorithm development, but also of validation and calibration. We seek to use our unique opportunity for multi-site collaboration to advance knowledge in this area for the benefit of clinical and computational scientists.

• To compare and contrast the results of tractography algorithms included in or supported by the NA-MIC Toolkit on a benchmark dataset of Diffusion Tensor Imaging (DTI) data.
  
• To develop a framework for systematically and statistically comparing and contrasting these outcome measures mapped to specific manuscript preparation.
  
• To map out appropriate leadership for each of the proposed manuscripts.
  
• To initiate development of tutorials for tractography algorithms not yet in the NAMIC Training Compendium.
  
• To propose methods for NA-MIC benchmarks of calibration and validation of tractography algorithms for further discussion at the 2008 AHM.
  

Conference Logistics

• October 1-2, 2007, 8:00 AM- 5:00 PM
  
• The workshop is being held in the Governors Room at the Inn of the Governors, 101 W. Alameda, Sante Fe, NM 87501, 1-800-234-4534, http://www.innofthegovernors.com/
  
• We have booked a block of rooms for $169.00/night for single or double occupancy September 30- October 3, 2007 (Sunday through Tuesday nights). Our reservation code is "NAMIC" and the deadline for reservations is August 31, 2007. The price includes a full breakfast buffet, wireless internet access in the lobby, meeting room and sleeping rooms at no additional cost.
  
• Fly into Albuquerque, NM. Information about shuttles from the airport to the hotel can be found here http://www.sandiashuttle.com/.

Many grateful thanks to John Rasure and Debbie Lynch of the MIND Institute for their assistance in making these arrangements.

Registration

• To register, add your name to the list of attendees below and make your flight and hotel reservations

• Questions about logistics and the content of the Conference should be addressed to Randy Gollub (rgollub at partners.org).

• This Conference is supported by the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on the National Centers for Biomedical Computing can be obtained from http://nihroadmap.nih.gov/bioinformatics.

Conference Attendees

1. Ross Whitaker, PhD
2. Guido Gerig, PhD
3. Casey Goodlett, Utah
4. Carl-Fredrik Westin, PhD
5. Marek Kubicki, MD, PhD
6. Sylvain Bouix, PNL
7. Randy Gollub, MD, PhD, Harvard Medical School (Department of Psychiatry and Martinos Center, Department of Radiology, Massachussets General Hospital)
8. Sonia Pujol, PhD, Harvard Medical School (Surgical Planning Laboratory, Department of Radiology, Brigham and Women's Hospital)
9. H. Jeremy Bockholt, The MIND Institute
10. John Melonakos, Georgia Tech
11. Ron Kikinis, MD
12. Tom Fletcher, Utah
13. Dennis Jen, MGH
14. Anastasia Yendiki, MGH
15. Allen Song, PhD Duke
16. Tri Ngo, BWH
17. Marc Niethammer, BWH
18. Lauren O'Donnell, BWH
19. Vincent Magnotta, Iowa

Preparation for Workshop -- Important Information for all attendees

Suggestions: Notes from July 31 Planning T-con with detailed "To Dos"

Suggested background reading for workshop:

1. Guido's 2006 AHM presentation on Validation strategies for DTI analysis
2. Media:DWI.reproducibility.pdf
3. [If any of you attended the 2005 ISMRM Workshop on Methods for Quantitative Diffusion of MRI of Human Brain and can get us access to the detailed summary, I have seen it and it might be very useful]
4. Presentations by and Fitzpatrick from the MICCAI 2003 Tutorial on Validation in Medical Image Processing
5. Peruse the webpages associated with the Retrospective Image Registration Evaluation project
6. anyone have access to this?
7. Sylvain's segmentation comparison manuscript
8. CF Westin's experimental study manuscript

Please complete the following items prior to the workshop. This is hands-on Conference. All participants must come with their own computer loaded with the calibration data and the results of their own algorithm analysis.

Benchmark Datasets

Agenda

October 1, Meeting 8:30 AM - 5 PM

• 7:30- 8:30 AM Enjoy the breakfast buffet at the hotel
• 8:30 - 8:40 AM Goals of Conference
• 8:40 - 10:15 AM presentations of results from each of the participants & discussion see
• 10:15 -10:30 Coffee Break
• 10:30 - 11:45 AM continue presentations of results from each of the participants & discussion
• 11:45 - 1:00 Lunch together at local restaurant
• 1:00 - 3:00 PM Discuss methods and metrics for contrasting/comparing tractography outcome measures
• 3:00 - 3:15 PM Coffee Break
• 3:15 - 5:00 PM Continue to discuss methods and metrics for contrasting/comparing tractography outcome measures

• 7:00 PM Dinner at local resturant(s) to be found by wandering around town

October 2, 8:30 AM - 5 PM

• 7:30- 8:30 AM Enjoy the breakfast buffet at the hotel
• 8:30 - 8:40 AM Synopsis of yesterday's accomplishments
• 8:40 - 10:15 Discuss what to do next on this project
• 10:15 -10:30 Coffee Break
• 10:30 - 11:45 Continue to formulate a plan for next steps on this project
• 11:45 - 1:00 PM Lunch together at local restaurant
• 1:00 - 3:00 PM ?
• 3:00 - 3:15 PM Coffee Break
• 3:15 - 5:00 PM Formulation of action plan and assignment of tasks

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