Difference between revisions of "Projects:EMSegmenterSoftwareDevelopment"

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= EM Segmenter Software Development =
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  Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]]
 
  Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]]
  
'''Objective:'''
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'''Objective'''
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Incorporate the EMSegment algorithm---an automatic segmentation
 
Incorporate the EMSegment algorithm---an automatic segmentation
 
algorithm for medical images---into Slicer3.  Create a simplified,
 
algorithm for medical images---into Slicer3.  Create a simplified,
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'''Progress:'''
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'''Progress'''
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*A basic version of the EMSegment module is complete and is included in the current version of Slicer3.   
 
*A basic version of the EMSegment module is complete and is included in the current version of Slicer3.   
 
*The module was demonstrated at a tutorial session during the January 2007 NAMIC all-hands meeting.   
 
*The module was demonstrated at a tutorial session during the January 2007 NAMIC all-hands meeting.   
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'''Key Investigators:'''
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'''Key Investigators'''
Kilian Pohl, Brad Davis, Sebastien Barre, Yumin Yuan, Polina Golland
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* Kilian Pohl, Brad Davis, Sebastien Barre, Yumin Yuan, Polina Golland
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'''Links'''
  
'''Links:'''
 
 
* [[Slicer3:EM| Slicer3 EMSegment Page]]
 
* [[Slicer3:EM| Slicer3 EMSegment Page]]
 
* [[Media:NAMIC-AHM07-EMTutorialV2.ppt | Tutorial Slides]]
 
* [[Media:NAMIC-AHM07-EMTutorialV2.ppt | Tutorial Slides]]
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* [[Media:2007_Project_Half_Week_EMSegment.ppt | 4-block PPT Jan 2007]]
 
* [[Media:2007_Project_Half_Week_EMSegment.ppt | 4-block PPT Jan 2007]]
  
'''Screen Shot:'''
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''Screen Shot''
 
[[Image:EMSegmentation_Results_Screenshot.png| EMSegmentation Results Screenshot | 400px]]
 
[[Image:EMSegmentation_Results_Screenshot.png| EMSegmentation Results Screenshot | 400px]]

Revision as of 00:33, 4 September 2007

Home < Projects:EMSegmenterSoftwareDevelopment

EM Segmenter Software Development

Back to NA-MIC_Collaborations

Objective

Incorporate the EMSegment algorithm---an automatic segmentation algorithm for medical images---into Slicer3. Create a simplified, wizard-style interface to the algorithm.


Progress

  • A basic version of the EMSegment module is complete and is included in the current version of Slicer3.
  • The module was demonstrated at a tutorial session during the January 2007 NAMIC all-hands meeting.
  • Current and future work includes validation, the addition of image registration and intensity normalization, user interface improvements, and bug fixes.


Key Investigators

  • Kilian Pohl, Brad Davis, Sebastien Barre, Yumin Yuan, Polina Golland


Links

Screen Shot EMSegmentation Results Screenshot