Difference between revisions of "2008 Summer Project Week:ProstateSegReg"

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|[[Image:ProjectWeek-2008.png|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
 
|[[Image:ProjectWeek-2008.png|thumb|320px|Return to [[2008_Summer_Project_Week|Project Week Main Page]] ]]
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|[[Image:SlicerRandomWalkProstate.png |thumb|320px| Segmentation for prostate. Random Walk algorithm as a slicer command line module. ]]
 
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* Allen Tannenbaum, Yi Gao, Georgia Tech
 
* Allen Tannenbaum, Yi Gao, Georgia Tech
 
* Gabor Fichtinger, Purang Abolmaesumi, Siddharth Vikal, David Gobbi, Queen's University
 
* Gabor Fichtinger, Purang Abolmaesumi, Siddharth Vikal, David Gobbi, Queen's University
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* Luis Ibanez, Kitware
  
  
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<h1>Progress</h1>
 
<h1>Progress</h1>
Currently algorithms are in C++ and is ready to be integrated.
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During the project week:
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* done: 3D Random Walk Segmentation Slicer3 command line module.
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* done: [[Projects:ConformalFlatteningRegistration#Conformal_Flattening_Slicer3_module|Conformal Flattening]] ITK filter plugged in Slicer3 as a command line module.
 
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Latest revision as of 13:50, 27 June 2008

Home < 2008 Summer Project Week:ProstateSegReg
Segmentation for prostate. Random Walk algorithm as a slicer command line module.


Key Investigators

  • Allen Tannenbaum, Yi Gao, Georgia Tech
  • Gabor Fichtinger, Purang Abolmaesumi, Siddharth Vikal, David Gobbi, Queen's University
  • Luis Ibanez, Kitware


Objective

  • To integrate current segmentation algorithm into the software environment being used by Core 3 people.
  • Discuss the scenario for the next step's registration of prostates.

Approach, Plan

Currently the algorithms have been implemented either in ITK or local C++ code. We'll discuss with Core 3 collaborators to put that into the software they are using to help with the segmentation work.

Progress

During the project week:

  • done: 3D Random Walk Segmentation Slicer3 command line module.
  • done: Conformal Flattening ITK filter plugged in Slicer3 as a command line module.


References