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| − | == Progress - i.e. what I have done so far==
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| − | {| border="0" cellpadding="3" cellspacing=0
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| − | |- bgcolor="#abcdef"
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| − | ! Month !! Week # !! Start Date - End Date !! Done !! Date Done
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| − | |-
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| − | |height=5|
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| − | |- bgcolor="#D0D0D0"
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| − | !| February !! Week 05 !! 27.01 - 01.02 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Slices and tracker matrices are sended to Slicer in real-time ||align="center" | x || Fri Jan, 16th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 04 !! 19.01 - 26.01 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Literature research complete ||align="center" | x || Thu Jan, 22th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 03 !! 12.01 - 18.01 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | - ||align="center" | ||
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 02 !! 05.01 - 11.01 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | - ||align="center" | ||
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| − | |- bgcolor="#D0D0D0"
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| − | !| January !! Week 01 !! 29.12 - 04.01 || ||
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| − | |-
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| − | |height="20px" |
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| − | |-
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| − | | || colspan="2" | - ||align="center" | ||
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 52 !! 22.12 - 28.12 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Trilinear Interpolation works ||align="center" | x || Wed Dec, 17th
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| − | |-
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| − | | || colspan="2" | Reconstructed Volume has correct depth ||align="center" | x || Tue Dec, 16th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 51 !! 15.12 - 21.12 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Created Slicer Module to start Synchrograb within Slicer ||align="center" | x || Wed Dec, 10th
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| − | |-
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| − | | || colspan="2" | Ultrasound device module works ||align="center" | x || Tue Dec, 9th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 50 !! 08.12 - 14.12 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Fixed vtk3DPanoramicReconstructor together with Noby ||align="center" | x || Fri Dec, 5th
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| − | |-
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| − | | || colspan="2" | NDI Tracker module works ||align="center" | x || Wed Dec, 3rd
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| − | |- bgcolor="#D0D0D0"
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| − | !| December !! Week 49 !! 01.12 - 07.12 || ||
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| − | |-
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| − | | height="20px"|
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| − | |-
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| − | | || colspan="2" | - ||align="center" | ||
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 48 !! 24.11 - 30.11 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | vtkVideoSource works ||align="center" | x || Mon Nov, 24th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 47 !! 17.11 - 23.11 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | 3D Volume generated with mock-up images and mock-up tracking data ||align="center" | x || Mon Nov, 17th
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| − | |- bgcolor="#E8E8E8"
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| − | !bgcolor="#FFFFFF"| !! Week 46 !! 10.11 - 16.11 || ||
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| − | |-
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| − | | height="10px"|
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| − | |-
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| − | | || colspan="2" | Tracker Simulator works ||align="center" | x || Thu Nov, 13th
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| − | |- bgcolor="#E8E8E8"
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| − | ! bgcolor="#FFFFFF"| !! Week 45 || 03.11 - 09.11 || ||
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| − | |-
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| − | |height="10px" |
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| − | |-
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| − | | || colspan="2" | Ultrasound Simulator works ||align="center" | x || Tue Nov, 4th
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| − | |- bgcolor="#D0D0D0"
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| − | ! November !! | Week 44 || 27.10 - 02.11 || ||
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| − | |-
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| − | | height="20px"|
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| − | |-
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| − | | || colspan="2" | Starting work on "Creating a 3D-Volume with Synchrograb"||align="center" | ||
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| − | |- bgcolor="#E8E8E8"
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| − | ! bgcolor="#FFFFFF"| !! Week 43 || 20.10 - 26.10 || ||
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| − | |-
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| − | | height="10px"|
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| − | |-
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| − | | || colspan="2" |Send Volume Data via OpenIGTLink from SynchroGrab to Slicer ||align="center" | x || Tue Oct, 14th
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| − | |-
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| − | | || colspan="2" |Compile SynchroGrab (using latest OpenIGTLink Library) ||align="center" | x || Tue Oct, 14th
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| − | |- bgcolor="#E8E8E8"
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| − | ! bgcolor="#FFFFFF"| !! Week 42 || 13.10 - 19.10 || ||
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| − | |-
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| − | | height="10px"|
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| − | |-
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| − | | || colspan="2" | Understand and Use OpenIGTLink || align="center" | x || Tue Oct, 7th
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| − | |- bgcolor="#E8E8E8"
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| − | ! bgcolor="#FFFFFF"| !! Week 41 || 06.10 - 12.10 || ||
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| − | |-
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| − | |height=10|
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| − | |-
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| − | | || colspan="2" |Get CUDA Rendering Volume working in Slicer || align="center" |x || Wed Oct, 2nd
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| − | |-
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| − | | || colspan="2" |Set up CUDA driver on th303_d4_6 || align="center" | x || Tue Sep, 30th
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| − | |- bgcolor="#D0D0D0"
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| − | ! October !! Week 40 || 29.09 - 5.10 || ||
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| − | |-
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| − | | height="20px"|
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| − | |-
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| − | | || colspan="2" | Set up Fedora 8 on th303_d4_6 || align="center" | x || Fri Sep, 26th
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| − | |-
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| − | | || colspan="2" | Totally Understand GradientDiffusion Filter Module || align="center" | x || Thu Sep, 25th
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| − | |- bgcolor="#D0D0D0"
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| − | ! September !! Week 39 || 22.09 - 28.09 || ||
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| − | |-
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| − | |}
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| | | | |
| | == Other Stuff to do == | | == Other Stuff to do == |
Wikipage of Jan Gumprecht
About Myself
I am a student in Computer Engineering from the University of Mannheim, Germany with a specification in Optoelectronics. At the moment I am writing my diploma thesis on the project described below. This is not my first stay in North America. I studied in Waterloo, On, Canada from September 2006 to August 2007 .
Contact Information
If you would like to contact me feel free to write me an e-mail.
E-mail: jgumprec (at sign) bwh.harvard.edu
Project - Development and Validation of an Open-Source Real-Time Freehand 3D Ultrasound Navigation System for Liver Surgery with GPGPU Acceleration
In my project I am developing a Software for "Integrated Real-Time 3D Ultrasound Navigation" with the name 4DUltrasound. The program creates a 3D volume of recorded ultrasound frames in teal-time. The output of 4DUltrasound is forwarded via OpenIGTLink to Slicer3D.
The main part of the project will be the connection of SynchroGrab to Slicer3D via OpenIGTLink.
Synchrograb is an Open-Source software that generates 3D ultrasound volumes.
After discussing with Junichi I got a deeper understanding of how the technical solution might look like.
This will be the technical approach.
Technical Information
All technical Information can be found here: Technical Information
Progress
Here you can see the progress of my project: 4D Ultrasound Progress
Other Stuff to do
Find a new cart for the ultrasound unit
- Infos in the intraweb
- Figure out what hardware and how much space on the cart I need
- CUDA Card
- Capture Card
- Ultrasound device
- Tracker device
- Uninterruptible power supply
General
Links
Infos on loadable Modules
HowTo Loadable Module
HowToLoadable Module GUI
Infos about Executable Modules inSlicer
Subscribe to different meetings
- Journal Club
- 1st Monday Seminar
- Office OPRC
- Radiology Grand Rounds
- Cimit Forum
