Difference between revisions of "2009 Summer Project Week Lupus Lesion Segmentation"
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Revision as of 01:55, 22 June 2009
Home < 2009 Summer Project Week Lupus Lesion Segmentation
Manual tracing of lupus lesions.
Predicted Heat Map.
Heat Map after thresholding.
Key Investigators
- MRN: H. Jeremy Bockholt, Mark Scully
- Isomics: Steve Pieper
Objective
To create an end-to-end Lupus lesion segmentation and analysis pipeline that can work in both an automated and semi-supervised fashion.
See our Roadmap for more details.
Approach, Plan
Our approach involves the combination of morphometric features with a non-linear classifier in order to capture more of the gestalt properties a human rater uses when segmenting Lupus lesions.
Our plan for the project week is to:
- Work with Steve Pieper to implement the wizard interface to the lesion analysis module to make the segmentation process easier.
- Integrate the output of the lesion analysis module with change tracker to allow for longitudinal analysis.
- Refactor the lesion analysis code and integrate it with the Slicer code repository so it is built with Slicer.
Progress
