Difference between revisions of "DBP:Harvard:Software:Minutes:10"

Latest revision as of 14:01, 18 December 2006

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Present: Doug, Kate, Marc, Sylvain, Jenny, Martha, Gordon, Toshiro, CF, Katharina, Gudrun, Marek

Review of last week

Fornix tractography
- Sylvain spent time with Doug and Kate this week to figure out the 'bad' fornix cases, but they weren't able to remedy the problem cases. Lowering the anisotropy threshold does not help.
- Sylvain will email case to Gordon so that he can take a closer look
Cutting tracts
- Marc wrote a Matlab script to read in tracts (.vtk) and cut along planar labelmap ROIs. Doug will show the output of the script at the next meeting.

OR function in DTMRI

Sylvain noted that there is no 'OR' function when selecting tracts in DTMRI (while you can use 'AND' and 'NOT'). He will talk to Raul about adding this option into the module.

NAMIC Meeting next week

Next tuesday there will be a meeting between Cores 1 and 3. Sylvain and Marc will be demonstrating ongoing work.

@@ Line 1: / Line 1: @@
-''Agenda for 10-26-05 Meeting''
+==== DTI Meeting Minutes | October 11, 2006 ====
-<br />
+<br /> Present: Doug, Kate, Marc, Sylvain, Jenny, Martha, Gordon, Toshiro, CF, Katharina, Gudrun, Marek
-* [[DBP:Harvard:Software:Testing:DTI:Slicer|Software Testing]], DTMRI module
+<br />'''Review of last week'''
-** Sylvain, any updates for NRRD headers/caseD20?
-<br />
+# Fornix tractography
+#* Sylvain spent time with Doug and Kate this week to figure out the 'bad' fornix cases, but they weren't able to remedy the problem cases. Lowering the anisotropy threshold does not help.
+#* Sylvain will email case to Gordon so that he can take a closer look
+# Cutting tracts
+#* Marc wrote a Matlab script to read in tracts (.vtk) and cut along planar labelmap ROIs. Doug will show the output of the script at the next meeting.
-* UNC Fiberviewer appears to work fine
+<br />'''OR function in DTMRI'''
-** How do we want to use it?
-** Do we need to test it somehow? (measuring FA/ADC along fibers, etc.)
-<br />
+* Sylvain noted that there is no 'OR' function when selecting tracts in DTMRI (while you can use 'AND' and 'NOT'). He will talk to Raul about adding this option into the module.
-* Corpus pics
+<br />'''NAMIC Meeting next week'''
-<br />
+* Next tuesday there will be a meeting between Cores 1 and 3. Sylvain and Marc will be demonstrating ongoing work.
-* Lauren: Fiber clustering, backtracking to corpus labelmap?