Difference between revisions of "NA"

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'''Objective:'''
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'''Objective:''' We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.
  
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To enable cross-platform packaging and distribution of software.
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'''Progress:''' Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version has been submitted.
  
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'''Progress:'''
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''References:''
  
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Packaging and distributing software across multiple computer platforms (hardware, operating system and compiler) has been a difficult, error prone and time consuming process. CPack is an adjunct component of CMake that addresses this issue. It uses the concept of ''generators'' from CMake, where a generator abstracts the platform specific packaging issues. CPack is a new software tool whose development was initiated in the second year of NA-MIC funding. Initial results includes support for Mac OSX using PackageMaker, Windows using Nullsoft Scriptable Installer System (NSIS), and Unix using self extracting TAR file. Future work includes support for more generators, such as Red Hat RPM, Debian DEB, and Microsoft MSI.
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* Corouge, I., Fletcher, T., Joshi, S., Gilmore J.H., and Gerig, G., Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis, Lecture Notes in Computer Science LNCS, James S. Duncan and Guido Gerig, editors, Springer Verlag, Vol. 3749, Oct. 2005, pp. 131 -- 138
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* C. Goodlett, I. Corouge, M. Jomier, and G. Gerig, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .
  
 
'''Key Investigators:'''
 
'''Key Investigators:'''
  
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Andy Cedilnik
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* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig
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* Utah: Tom Fletcher, Ross Whitaker
  
 
'''Links:'''
 
'''Links:'''
  
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* http://www.cmake.org
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* [[Progress_Report:Diffusion_Tensor_Statistics|Diffusion Tensor Statistics Progress Report]]
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* http://nsis.sourceforge.net
 
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* http://developer.apple.com/documentation/developertools/Conceptual/SoftwareDistribution/index.html
 

Revision as of 14:03, 18 December 2006

Home < NA

Objective: We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.

Progress: Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the DTI Software Infrastructure project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version has been submitted.

References:

  • Corouge, I., Fletcher, T., Joshi, S., Gilmore J.H., and Gerig, G., Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis, Lecture Notes in Computer Science LNCS, James S. Duncan and Guido Gerig, editors, Springer Verlag, Vol. 3749, Oct. 2005, pp. 131 -- 138
  • C. Goodlett, I. Corouge, M. Jomier, and G. Gerig, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .

Key Investigators:

  • UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig
  • Utah: Tom Fletcher, Ross Whitaker

Links:

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