Difference between revisions of "NA"

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  Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]]
 
  Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]]
  
'''Objective:''' To make existing tools for quantitative DTI tract analysis available through Slicer
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'''Objective:''' To improve segmentation of brain structures.
  
'''Progress:'''
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'''Progress:''' We have combined registration of an atlas with MRI images using the Expectation-Maximization algorithm which simultaneously estimates image inhomogeneities, anatomical label maps, and a mapping from the atlas to the image space. The software is being ported to ITK.
  
* Proof of concept integration between FiberTracking and Slicer 3 to pass scalar image data
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''' Recent Publications'''
* Script and XML description to integrate external applications to Slicer 3
 
  
'''Key Investigators:'''
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* K.M. Pohl, J. Fisher, J.J. Levitt, M.E. Shenton, R. Kikinis, W.E.L. Grimson, and W.M. Wells, “ A Unifying Approach to Registration, Segmentation, and Intensity Correction, ” In Proc. MICCAI 2005: Eigth International Conference on Medical Image Computing and Computer Assisted Intervention, Palm Springs, CA, USA, Springer-Verlag, Part I, vol. 3749 of Lecture Notes in Computer Science, pp. 310-318, 2005
  
* UNC: Casey Goodlett, Guido Gerig
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'''Key Investigators'''<nowiki>: </nowiki>
* GE: Bill Lorensen, Jim Miller
 
* Isomics: Steve Pieper
 
  
[[Image:Slicer3-ft-2.png|[[Image:500px-Slicer3-ft-2.png]]]]
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* Harvard PNL: Sylvain Bouix, Motoaki Nakamura, Min-Seong Koo, Martha Shenton.
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* MIT: Kilian Pohl, Sandy Wells, Eric Grimson
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* Kitware: Luis Ibanez, Karthik Krishnan
  
 
'''Links:'''
 
'''Links:'''
  
* [[Slicer3:FiberTrackingIntegration|Technical details of integration]]
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* [[DBP:Harvard:Collaboration:MIT|DBP:Harvard:Collaboration:MIT]]
* [[Media:2006_Summer_Project_Week_FiberTracking_Slicer_Integration.ppt|2006 Project Week 4-block]]
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* [[Progress_Report:Shape_Based_Segmentation_And_Registration|Progress_Report:Shape_Based_Segmentation_And_Registration]]

Revision as of 14:03, 18 December 2006

Home < NA
Back to NA-MIC_Collaborations

Objective: To improve segmentation of brain structures.

Progress: We have combined registration of an atlas with MRI images using the Expectation-Maximization algorithm which simultaneously estimates image inhomogeneities, anatomical label maps, and a mapping from the atlas to the image space. The software is being ported to ITK.

Recent Publications

  • K.M. Pohl, J. Fisher, J.J. Levitt, M.E. Shenton, R. Kikinis, W.E.L. Grimson, and W.M. Wells, “ A Unifying Approach to Registration, Segmentation, and Intensity Correction, ” In Proc. MICCAI 2005: Eigth International Conference on Medical Image Computing and Computer Assisted Intervention, Palm Springs, CA, USA, Springer-Verlag, Part I, vol. 3749 of Lecture Notes in Computer Science, pp. 310-318, 2005

Key Investigators:

  • Harvard PNL: Sylvain Bouix, Motoaki Nakamura, Min-Seong Koo, Martha Shenton.
  • MIT: Kilian Pohl, Sandy Wells, Eric Grimson
  • Kitware: Luis Ibanez, Karthik Krishnan

Links: