Difference between revisions of "Projects:ARRA:SlicerWF:UseCaseScenarios"

From NAMIC Wiki
Jump to: navigation, search
m
Line 14: Line 14:
 
# Human Interaction module loads image volumes into Slicer with fiduciary markers for lesion assessment
 
# Human Interaction module loads image volumes into Slicer with fiduciary markers for lesion assessment
 
=Use-case COPD=
 
=Use-case COPD=
 +
[[File:WF_IntegrationDiagram_General.jpg]]
  
 
=External use-cases=
 
=External use-cases=
 
* see also [[2009_Summer_Project_Week_Slicer3_XNAT_usecases#Use_Case_3:_Quality_Control_Processing_of_Large_Studies| Hans Johnsons scenario]] for similarities.
 
* see also [[2009_Summer_Project_Week_Slicer3_XNAT_usecases#Use_Case_3:_Quality_Control_Processing_of_Large_Studies| Hans Johnsons scenario]] for similarities.

Revision as of 22:45, 20 November 2009

Home < Projects:ARRA:SlicerWF:UseCaseScenarios
Back to SPINE ARRA page

Overview

  • Oct-20-2009
  • Meeting with Charles and Alex. Discussed following use-case scenario:
    • Data lives in XNAT
    • Black box processing pipeline applied to data
      • Results back to XNAT after QC for completeness
      • MRML file gets autogenerated
    • Data loaded into Slicer for interactive editing of label maps as QC
    • Results loaded back into XNAT

Use-case MS lesion Assessment

  1. Workflow "blackbox" generates lesion maps along with lesion coordinates files
  2. Human Interaction module loads image volumes into Slicer with fiduciary markers for lesion assessment

Use-case COPD

WF IntegrationDiagram General.jpg

External use-cases