Difference between revisions of "Projects:ARRA:SlicerEM:AtlasCreator:Tests"
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=== 02: Fixed with BRAINSFit on 6 Cases === | === 02: Fixed with BRAINSFit on 6 Cases === | ||
| − | * Machine: | + | * Machine: sbia-pc66 |
** CPU: ? | ** CPU: ? | ||
** RAM: ? | ** RAM: ? | ||
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* Toolkit: BRAINSFit | * Toolkit: BRAINSFit | ||
* Registration Type: Affine | * Registration Type: Affine | ||
| − | * Runtime: | + | * Runtime: 29 minutes |
* Log: [[File:02Log.txt]] | * Log: [[File:02Log.txt]] | ||
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Image:02exampleBeforeAndAfter2.png|Checkerboard: Before-Template and After-Template 2 | Image:02exampleBeforeAndAfter2.png|Checkerboard: Before-Template and After-Template 2 | ||
</gallery> | </gallery> | ||
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=== 03: Dynamic with CMTK on 6 Cases === | === 03: Dynamic with CMTK on 6 Cases === | ||
Revision as of 17:17, 7 March 2011
Home < Projects:ARRA:SlicerEM:AtlasCreator:TestsContents
- 1 Atlas Creator Tests
- 1.1 01: Fixed with CMTK on 6 Cases
- 1.2 02: Fixed with BRAINSFit on 6 Cases
- 1.3 03: Dynamic with CMTK on 6 Cases
- 1.4 04: Dynamic with BRAINSFit on 6 Cases
- 1.5 05: Fixed with CMTK on 50 Cases
- 1.6 06: Fixed with BRAINSFit on 50 Cases
- 1.7 07: Dynamic with BRAINSFit on 50 Cases
- 1.8 08: Dynamic with CMTK on 50 Cases
Atlas Creator Tests
Successful tests running the Atlas Creator are shown here.
01: Fixed with CMTK on 6 Cases
- Machine: b2-t74-2
- CPU: 4x Xeon 3 GHz
- RAM: 32 GB
- OS: Linux 64
- AtlasCreator Version: 0.21
- No. of Cases: 6 (5 against 1 template)
- Template Type: Fixed
- Toolkit: CMTK
- Registration Type: Affine
- Runtime: 11 minutes
- Log: File:Log.txt
- MRML Scene: File:01cmtkFixed.zip
Fixed Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 8 output
Atlas for label 10 output
Checkerboard: Before-Template and After-Template
Checkerboard: Before-Template and After-Template 2
02: Fixed with BRAINSFit on 6 Cases
- Machine: sbia-pc66
- CPU: ?
- RAM: ?
- OS: ?
- AtlasCreator Version: 0.21
- No. of Cases: 6 (5 against 1 template)
- Template Type: Fixed
- Toolkit: BRAINSFit
- Registration Type: Affine
- Runtime: 29 minutes
- Log: File:02Log.txt
- MRML Scene: File:02brainsfitFixed.zip
- 02template.png
Fixed Template
- 02atlas.png
Combined Atlas output
- 02atlas3.png
Atlas for label 3 output
- 02atlas4.png
Atlas for label 4 output
- 02atlas5.png
Atlas for label 5 output
- 02atlas6.png
Atlas for label 6 output
- 02atlas8.png
Atlas for label 8 output
- 02atlas10.png
Atlas for label 10 output
- 02exampleBeforeAndAfter.png
Checkerboard: Before-Template and After-Template
- 02exampleBeforeAndAfter2.png
Checkerboard: Before-Template and After-Template 2
03: Dynamic with CMTK on 6 Cases
- Machine: sbia-pc66
- CPU: 4x Core i7 2.66 GHz
- RAM: 8 GB
- OS: Mac OS X Snow Leopard
- AtlasCreator Version: 0.21
- No. of Cases: 6
- Template Type: Dynamic
- Iterations: 2
- Toolkit: CMTK
- Registration Type: Affine
- Runtime: 28 minutes
- Log: File:03Log.txt
- MRML Scene: File:03cmtkDynamic.zip
Dynamic Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
04: Dynamic with BRAINSFit on 6 Cases
- Machine: sbia-pc66
- CPU: 4x Core i7 2.66 GHz
- RAM: 8 GB
- OS: Mac OS X Snow Leopard
- AtlasCreator Version: 0.21
- No. of Cases: 6
- Template Type: Dynamic
- Iterations: 2
- Toolkit: BRAINSFit
- Registration Type: Affine
- Runtime: 64 minutes
- Log: File:04Log.txt
- MRML Scene: File:04brainsfitDynamic.zip
Dynamic Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
05: Fixed with CMTK on 50 Cases
- Machine: b2-t74-3
- CPU: 4x Xeon 3 GHz
- RAM: 32 GB
- OS: Linux 64
- AtlasCreator Version: 0.21
- No. of Cases: 50 (49 against 1 template), skull-stripped + bias corrected
- Template Type: Fixed
- Toolkit: CMTK
- Registration Type: Affine
- Runtime: 162 minutes
- Log: File:05CmtkFixed.txt
- MRML Scene: File:05cmtkFixed.zip
Fixed Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
06: Fixed with BRAINSFit on 50 Cases
- Machine: b2-t74-3
- CPU: 4x Xeon 3 GHz
- RAM: 32 GB
- OS: Linux 64
- AtlasCreator Version: 0.21
- No. of Cases: 50 (49 against 1 template), skull-stripped + bias corrected
- Template Type: Fixed
- Toolkit: BRAINSFit
- Registration Type: Affine
- Runtime: 241 minutes
- Log: File:06brainsfitFixed.txt
- MRML Scene: File:06brainsfitFixed.zip
Fixed Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
07: Dynamic with BRAINSFit on 50 Cases
- Machine: b2-t74-3
- CPU: 4x Xeon 3 GHz
- RAM: 32 GB
- OS: Linux 64
- AtlasCreator Version: 0.21
- No. of Cases: 50
- Template Type: Dynamic
- Iterations: 5
- Toolkit: BRAINSFit
- Registration Type: Affine
- Runtime: 1244 minutes (< 24h)
- Log: File:07brainsfitDynamic.txt
- MRML Scene: File:07brainsfitDynamic.zip
Dynamic Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
08: Dynamic with CMTK on 50 Cases
- Machine: b2-t74-1
- CPU: 4x Xeon 3 GHz
- RAM: 32 GB
- OS: Linux 64
- AtlasCreator Version: 0.21
- No. of Cases: 50
- Template Type: Dynamic
- Iterations: 5
- Toolkit: CMTK
- Registration Type: Affine
- Runtime: 3099 minutes (>48 h)
- Log: File:08cmtkDynamic.txt
- MRML Scene: File:08cmtkDynamic.zip
Dynamic Template
Combined Atlas output
Atlas for label 3 output
Atlas for label 4 output
Atlas for label 5 output
Atlas for label 6 output
Atlas for label 7 output
Atlas for label 8 output
Atlas for label 9 output
Atlas for label 10 output
Atlas for label 31 output
Atlas for label 32 output
Checkerboard: Before-Template and After-Template
