Difference between revisions of "UNC SPHARM-PDM Tutorial"

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'''ShapeAnalysisModule data ''':  
 
'''ShapeAnalysisModule data ''':  
* on NITRC [http://www.nitrc.org/docman/index.php?group_id=308&selected_doc_group_id=760&language_id=1#folder ShapeAnalysisModuleTutorialData_TutorialContestSummer2011]  
+
*[http://www.nitrc.org/docman/index.php?group_id=308&selected_doc_group_id=760&language_id=1#folder Link to NITRC ]  
* or directly [[Media:ShapeAnalysisModuleTutorialData_TutorialContestSummer2011.zip|‏ here]]
+
* or directly here :[[Media:ShapeAnalysisModuleTutorialData_TutorialContestSummer2011.zip|‏ ShapeAnalysisModuleTutorialData_TutorialContestSummer2011.zip]]
  
 
'''ShapeAnalysisMANCOVA_Wizard data ''':  ''NB: You can also use the output file of ShapeAnalysisModule.''
 
'''ShapeAnalysisMANCOVA_Wizard data ''':  ''NB: You can also use the output file of ShapeAnalysisModule.''
* on NITRC [http://www.nitrc.org/docman/index.php?group_id=294&selected_doc_group_id=1966&language_id=1#folder ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011]  
+
* [http://www.nitrc.org/docman/index.php?group_id=294&selected_doc_group_id=1966&language_id=1#folder Link to NITRC ]  
* or directly [[Media:ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011.zip|‏ here]]
+
* or directly here :[[Media:ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011.zip|‏ ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011.zip]]
 
 
  
 
==Complementary documentation==
 
==Complementary documentation==

Revision as of 18:08, 3 June 2011

Home < UNC SPHARM-PDM Tutorial
SPHARMPDM Logo.gif


SPHARM-PDM (SPherical HARMonic - Point Distribution Model) Slicer3 Tutorial

Overview

SPHARM-PDM is a tool that computes point-based models using a parametric boundary description. The two following tutorials will allow you to perform :

  • Step by step analysis: With the ShapeAnalysisModule tutorial,you will learn how to load input volumes, run the module to generate triangulated surfaces with inherent correspondences and visualize them thanks to an intuitive quality control.
  • Step by step analysis: With the ShapeAnalysisMANCOVA_Wizard tutorial, you will learn how to use this graphic interface to load meshes, run a group test in order to get statistical result, displayed through MRML scene.


Tutorials

ShapeAnalysisModule tutorial : to perform structural shape analysis.‏ [ppt]‏ [pdf]

shapeAnalysisMANCOVA_Wizard tutorial : to perform statistical shape analysis.‏ [ppt]‏ [pdf]


Software

Slicer3.6.3

Slicer3 External modules -including BatchMake Description files


Tutorial materials

ShapeAnalysisModule data :

ShapeAnalysisMANCOVA_Wizard data : NB: You can also use the output file of ShapeAnalysisModule.

Complementary documentation

  • Paniagua B., Styner M., Macenko M., Pantazis D., Niethammer M, Local Shape Analysis using MANCOVA, Insight Journal, 2009 July-December, http://hdl.handle.net/10380/3124
  • Joshua Cates, Manasi Datar, P Thomas Fletcher and Ross Whitaker, ShapeWorksManual

People

Lucile Bompard
Clement Vachet
Beatriz Paniagua
Martin Styner


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