Difference between revisions of "User talk:Tamekue"
From NAMIC Wiki
| (8 intermediate revisions by the same user not shown) | |||
| Line 17: | Line 17: | ||
|- | |- | ||
| style="background:#CEE3F6; color:black"| '''<font color=black>2</font>''' | | style="background:#CEE3F6; color:black"| '''<font color=black>2</font>''' | ||
| − | | style="background:#CEE3F6; color:black"; align="left"|Implement the designed graphical user interface | + | | style="background:#CEE3F6; color:black"; align="left"|Implement the designed graphical user interface so that we can run it and navigate through the different wizard steps. |
| style="background:#ffffff; color:black"| '''<font color=black>12/22/10</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>12/22/10</font>''' | ||
| style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' | | style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' | ||
| Line 23: | Line 23: | ||
|- | |- | ||
| style="background:#CEE3F6; color:black"| '''<font color=black>3</font>''' | | style="background:#CEE3F6; color:black"| '''<font color=black>3</font>''' | ||
| − | | style="background:#CEE3F6; color:black"; align="left"|Implement a separate algorithm in python, which parse an array containing array elements representing centerline points with associated diameter. <br> Define a threshold value for diameters. The algorithm should detect all line segments, where associated | + | | style="background:#CEE3F6; color:black"; align="left"|Implement a separate algorithm in python, which parse an array containing array elements representing centerline points with associated diameter. <br> Define a threshold value for diameters. The algorithm should detect all line segments, where associated diameters are less than the defined threshold value and save them in a container. |
| style="background:#ffffff; color:black"| '''<font color=black>02/08/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>02/08/11</font>''' | ||
| style="background:#dbf3ff; color:black"|'''<font color=green>DONE</font>''' | | style="background:#dbf3ff; color:black"|'''<font color=green>DONE</font>''' | ||
| Line 29: | Line 29: | ||
|- | |- | ||
| style="background:#CEE3F6; color:black"| '''<font color=black>4</font>''' | | style="background:#CEE3F6; color:black"| '''<font color=black>4</font>''' | ||
| − | | style="background:#CEE3F6; color:black"; align="left"|Use the VMTK | + | | style="background:#CEE3F6; color:black"; align="left"|Use the VMTK modules avaible in Slicer 3 to extract and generate a sample of lumen line from a chosen dataset containing stenosis. <br> |
| − | Create a temporary stenosis detector molude in Slicer 3. <br>Import and customize the algorithm implemented at task 3, so that stenosis may be marked and | + | Create a temporary stenosis detector molude in Slicer 3. <br>Import and customize the algorithm implemented at task 3, so that stenosis may be marked and visualized in 3D view. Run and test the created module. |
| style="background:#ffffff; color:black"| '''<font color=black>02/20/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>02/20/11</font>''' | ||
| style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' | | style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' | ||
| style="background:#dbf3ff; color:black"| | | style="background:#dbf3ff; color:black"| | ||
|- | |- | ||
| − | | style="background:#CEE3F6; color:black"| '''<font color=black> | + | | style="background:#CEE3F6; color:black"| '''<font color=black>5</font>''' |
| style="background:#CEE3F6; color:black"; align="left"|Write expose for diploma thesis, find enough references. | | style="background:#CEE3F6; color:black"; align="left"|Write expose for diploma thesis, find enough references. | ||
| style="background:#ffffff; color:black"| '''<font color=black>03/13/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>03/13/11</font>''' | ||
| Line 41: | Line 41: | ||
| style="background:#dbf3ff; color:black"| | | style="background:#dbf3ff; color:black"| | ||
|- | |- | ||
| − | | style="background:#CEE3F6; color:black"| '''<font color=black> | + | | style="background:#CEE3F6; color:black"| '''<font color=black>6</font>''' |
| style="background:#CEE3F6; color:black"; align="left"|Transcribe the implemented graphical user interface with all wizard steps using python and import it into the module created above. | | style="background:#CEE3F6; color:black"; align="left"|Transcribe the implemented graphical user interface with all wizard steps using python and import it into the module created above. | ||
| style="background:#ffffff; color:black"| '''<font color=black>03/31/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>03/31/11</font>''' | ||
| − | | style="background:#dbf3ff; color:black"| '''<font color= | + | | style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' |
| style="background:#dbf3ff; color:black"| | | style="background:#dbf3ff; color:black"| | ||
|- | |- | ||
| − | | style="background:#CEE3F6; color:black"| '''<font color=black> | + | | style="background:#CEE3F6; color:black"| '''<font color=black>7</font>''' |
| − | | style="background:#CEE3F6; color:black"; align="left"|Extend the implementation of the module adding and customizing all different image processing steps (vessel enhancement, level-set segmentation, network extraction, centerline extraction and stenosis detection). <br> We will hereby be dealing with the automation of our tool, which | + | | style="background:#CEE3F6; color:black"; align="left"|Extend the implementation of the module adding and customizing all different image processing steps (vessel enhancement, level-set segmentation, network extraction, centerline extraction and stenosis detection). <br> We will hereby be dealing with the automation of our tool, which improves the user-friendliness by reducing the number of parameters usually required through the graphical user interface and with interactions between the different wizard steps. |
| style="background:#ffffff; color:black"| '''<font color=black>05/15/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>05/15/11</font>''' | ||
| − | | style="background:#dbf3ff; color:black"| '''<font color= | + | | style="background:#dbf3ff; color:black"| '''<font color=green>DONE</font>''' |
| style="background:#dbf3ff; color:black"| | | style="background:#dbf3ff; color:black"| | ||
|-" | |-" | ||
| Line 56: | Line 56: | ||
| style="background:#CEE3F6; color:black"; align="left"|Design and implement and test a diagramm, which gives an estimation of the stenosis detection results with different stenosis stages. <br>This will be include into evaluation step (last wizard step) of our module. | | style="background:#CEE3F6; color:black"; align="left"|Design and implement and test a diagramm, which gives an estimation of the stenosis detection results with different stenosis stages. <br>This will be include into evaluation step (last wizard step) of our module. | ||
| style="background:#ffffff; color:black"| '''<font color=black>06/20/11</font>''' | | style="background:#ffffff; color:black"| '''<font color=black>06/20/11</font>''' | ||
| − | | style="background:#dbf3ff; color:black"|'''<font color= | + | | style="background:#dbf3ff; color:black"|'''<font color=green>DONE</font>''' |
| style="background:#dbf3ff; color:black"| | | style="background:#dbf3ff; color:black"| | ||
|- | |- | ||
| style="background:#CEE3F6; color:black"| '''<font color=black>9</font>''' | | style="background:#CEE3F6; color:black"| '''<font color=black>9</font>''' | ||
| style="background:#CEE3F6; color:black"; align="left"|Evalutation of the tool on testing datasets | | style="background:#CEE3F6; color:black"; align="left"|Evalutation of the tool on testing datasets | ||
| − | | style="background:#ffffff; color:black"| '''<font color=black> | + | | style="background:#ffffff; color:black"| '''<font color=black>10/20/11</font>''' |
| − | | style="background:#dbf3ff; color:black"|'''<font color= | + | | style="background:#dbf3ff; color:black"|'''<font color=green>DONE</font>''' |
| − | | style="background:#dbf3ff; color:black"| | + | | style="background:#dbf3ff; color:black"|'''Almost..''' |
|- | |- | ||
| style="background:#CEE3F6; color:black"| '''<font color=black>10</font>''' | | style="background:#CEE3F6; color:black"| '''<font color=black>10</font>''' | ||
| style="background:#CEE3F6; color:black"; align="left"|Write and complete the thesis | | style="background:#CEE3F6; color:black"; align="left"|Write and complete the thesis | ||
| − | | style="background:#ffffff; color:black"| '''<font color=black> | + | | style="background:#ffffff; color:black"| '''<font color=black>10/15/11</font>''' |
| − | | style="background:#dbf3ff; color:black"|'''<font color= | + | | style="background:#dbf3ff; color:black"|'''<font color=green>OPEN</font>''' |
| − | | style="background:#dbf3ff; color:black"| | + | | style="background:#dbf3ff; color:black"|'''Almost..''' |
|} | |} | ||
Latest revision as of 12:19, 18 October 2011
Home < User talk:TamekueDiploma Thesis - Tasks
Time line table
| Task number | Tasks | Deadlines | Status | Comments |
| 1 | Design a prototyp of a wizard based graphical user interface. | 12/01/10 | DONE | |
| 2 | Implement the designed graphical user interface so that we can run it and navigate through the different wizard steps. | 12/22/10 | DONE | |
| 3 | Implement a separate algorithm in python, which parse an array containing array elements representing centerline points with associated diameter. Define a threshold value for diameters. The algorithm should detect all line segments, where associated diameters are less than the defined threshold value and save them in a container. |
02/08/11 | DONE | |
| 4 | Use the VMTK modules avaible in Slicer 3 to extract and generate a sample of lumen line from a chosen dataset containing stenosis. Create a temporary stenosis detector molude in Slicer 3. |
02/20/11 | DONE | |
| 5 | Write expose for diploma thesis, find enough references. | 03/13/11 | DONE | |
| 6 | Transcribe the implemented graphical user interface with all wizard steps using python and import it into the module created above. | 03/31/11 | DONE | |
| 7 | Extend the implementation of the module adding and customizing all different image processing steps (vessel enhancement, level-set segmentation, network extraction, centerline extraction and stenosis detection). We will hereby be dealing with the automation of our tool, which improves the user-friendliness by reducing the number of parameters usually required through the graphical user interface and with interactions between the different wizard steps. |
05/15/11 | DONE | |
| 8 | Design and implement and test a diagramm, which gives an estimation of the stenosis detection results with different stenosis stages. This will be include into evaluation step (last wizard step) of our module. |
06/20/11 | DONE | |
| 9 | Evalutation of the tool on testing datasets | 10/20/11 | DONE | Almost.. |
| 10 | Write and complete the thesis | 10/15/11 | OPEN | Almost.. |
