RSNA 2011

RSNA-2011 Slicer Tutorial

NA-MIC and NAC and NCIGT at RSNA

Agenda

Sunday, November 27	Monday, November 28	Tuesday, November 29	Wednesday, November 30	Thursday, December 1	Friday, December 2
8:00am-11:00am. 3D Slicer Exhibit, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 11:00am-12:30pm. RSNA Refresher Course: Quantitative Medical Imaging for Clinical Research and Practice. Room S401CD ---------------------------------------- 12:30pm-6:00 pm. 3D Slicer Exhibit Quantitative Imaging, Lakeside Learning Center, Hall E	8:00am-11:00am. 3D Slicer Exhibit,, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 11:15am-11:45am. QIRR Theater Presentation, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 12:15pm-1:15pm. Meet-The-Experts Session, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 1:15pm-6:00 pm. 3D Slicer Exhibit, Quantitative Imaging, Lakeside Learning Center, Hall E	8:00am-11:00am. 3D Slicer Exhibit, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 12:30pm-2:00pm. RSNA Refresher Course: 3D Visualization for radiological applications . Room S401CD ---------------------------------------- 12:30pm-6:00 pm. 3D Slicer Exhibit, Quantitative Imaging, Lakeside Learning Center, Hall E	8:00am-12:15pm. 3D Slicer Exhibit Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 12:15pm-1:15pm. Meet-The-Experts Session, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 1:15pm-6:00 pm. 3D Slicer Exhibit, Lakeside Learning Center, Hall E ---------------------------------------- 4:30pm-6:00pm. RSNA Refresher Course: Lifecycle of an Imaging Biomarker: From Validation to Dissemination Room S501ABC	8:00am-12:15pm. 3D Slicer Exhibit, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- Session starts at 10:30 am - Talk at 11:10am-11:20am. RSNA Paper presentation: Publicly Available RadLex-linked Anatomy Atlases for Image Analysis, Informatics and Education Room S402AB ---------------------------------------- 12:15pm-1:15pm. Meet-The-Experts Session, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E ---------------------------------------- 1:15pm-6:00pm. 3D Slicer Exhibit, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E	8:00am-12:45pm. 3D Slicer Exhibit,, Quantitative Imaging Reading Room, Lakeside Learning Center, Hall E

3D Interactive Visualization of DICOM images

The 3D Interactive Visualization of DICOM Images for Radiology Applications course will be offered by the National Alliance for Medical Image Computing (NA-MIC) in conjunction with the Neuroimage Analysis Center (NAC), at the 97th Scientific Assembly and Annual Meeting of the Radiological Society of North America (RSNA 2011). As part of the outreach missions of these NIH funded National Centers, we have developed an offering of freely available, multi-platforms open source software to enable medical image analysis research. The course along with the tutorial 3D Visualization datasets aim to introduce translational clinical scientists to the basics of viewing and interacting in 3D with DICOM volumes and anatomical models using the 3DSlicer software.

• CME Content Code: Informatics
• CME Credits Categories:
• AMA PRA Category 1 Credits™: 1.5
• ARRT Category A+ Credit: 1.5

Logistics

• Date: Tuesday November 29, 2011
• Time: 12:30-2:00 pm
• Location: Room Room S401CD, McCormick Conference Center, Chicago, Illinois

Teaching Faculty

• Kitt Shaffer, M.D. Ph.D., Boston University School of Medicine, Department of Radiology, Boston Medical Center, Boston, MA

• Sonia Pujol, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA

• Ron Kikinis, M.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA
• Valerie Humblet, Ph.D., Radiology, BI Deaconess Medical Center
• Steve Pieper, Ph.D., Isomics, Inc.
• Andriy Fedorov, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA

RSNA 2011 Quantitative Imaging Reading Room

A hands-on exhibit, The 3D Slicer open source software platform for segmentation, registration, quantitative analysis and 3D visualization of biomedical image data will be held during the RSNA 2011 Quantitative Imaging Reading Room (QIRR) from November 27 to December 2, 2011. The purpose of the exhibit will be to introduce translational clinical researchers to the capabilities of the 3DSlicer software. A team of 3DSlicer experts will be running hands-on demonstrations with sample datasets or, where appropriate, data provided by attendees. The demonstrations will include volume rendered head, thoracic and abdominal CT scans, MRI-based topographic parcellation of human brain, PET/CT quantitative assessment of tumor response, image-guided prostate interventions, longitudinal analysis of meningioma growth, white matter exploration for neurosurgical planning using Diffusion Tensor Imaging tractography, and registration and segmentation strategies for follow-up on cases of Traumatic Brain Injuries.

Logistics

• Date: Sunday November 27, 2011 - Friday December 2, 2011
• Time: 8 am - 5 pm (exhibit), 12:15pm-1:15 pm (Meet-the-experts session)
• Location: Booth LL-QRR 3009, McCormick Conference Center, Chicago, Illinois

Meet the Experts Sessions

Daily one-hour Meet-The-Experts sessions will be held as part of the Quantitative Imaging Room exhibit. The sessions will give participants an opportunity to interact with the on-site faculty through software demonstrations and general question and answer sessions, which will include a series of hands-on demonstrations of the 3DSlicer modules for quantitative imaging.

Teaching Faculty

• Ron Kikinis, MD, Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA
• Sonia Pujol, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA
• Randy Gollub, M.D., Ph.D., Martinos Center for Biomedical Imaging, Harvard Medical School, Department of Psychiatry, Massachusetts General Hospital, Boston MA
• Andriy Fedorov, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA
• Samira Farough, M.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women’s Hospital, Boston MA
• Steve Pieper, Ph.D., Isomics, Inc.

Quantitative Medical Imaging for Clinical Research and Practice

Technological breakthroughs in medical imaging hardware and the emergence of increasingly sophisticated image processing software tools permit the visualization and display of complex anatomical structures with increasing sensitivity and specificity. This workshop will begin with an introductory presentation of state-of-the-art, clinical examples of quantitative imaging biomarkers for diagnosis and clinical trial outcome measures. Cases from multiple imaging modalities and from multiple organ systems will be highlighted to illustrate the depth and breath of this field. Participants will then be led through a series of tutorials on the basics of viewing and processing DICOM volumes in 3D using 3D SLICER (www.SLICER.org). Specific hands-on demonstrations will focus on basic use of 3D Slicer software, quantitative measurements from PET/CT studies, and volumetric analysis of meningioma. The course is offered in collaboration with the Harvard Catalyst Clinical Translational Science Award (CTSA) Imaging Program and the Johns Hopkins Institute for Clinical and Translational Research.

• CME Credit Categories: Biomarkers/Quantitative Imaging; Informatics
• AMA PRA Category 1 Credits™: 1.5
• ARRT Category A+ Credit: 1.5

Instructors

• Author/Presenter: Katarzyna J. Macura MD, PhD (teaching conflict, will be replaced by Randy)
• Author/Presenter: Valerie Humblet PhD (talk+ hands-on tutorial)
• Author/Presenter: Ron Kikinis MD (hands-on teaching)
• Author/Presenter: Randy L. Gollub MD, PhD (hands-on teaching)
• Author/Presenter: Sonia Pujol, Ph.D (hands-on teaching)
• Author/Presenter: Steve Pieper, PhD (hands-on teaching)
• Author/Presenter: Andriy Fedorov, Ph.D. (hands-on teaching)

Logistics

• Date: Sunday, 11/27, 2011
• Time:11:00am-12:30pm
• Location: Room S401CD, McCormick Conference Center, Chicago, Illinois

Tutorial Material

• RSNA 2011 Slicer4 minute Tutorial dataset
• RNSA 2011 Change Tracker Tutorial dataset
• RSNA 2011 PET/CT Tutorial dataset
• Combined tutorial slides (pdf)

Instructors

• Author/Presenter: Michael Halle, PhD
• Author/Presenter:Samira Farough, MD,
• Author/Presenter:Marianna Jakab, MSc
• Author/Presenter:Ron Kikinis, MD

Logistics

• Thursday, December 1, 2011
• Time: 11:10 am -11:20 am
• Location: Room S402AB, McCormick Conference Center, Chicago, Illinois
  

Lifecycle of an Imaging Biomarker: From Validation to Dissemination

The Lifecycle of an Imaging Biomarker: From Validation to Dissemination course is offered by the Harvard Catalyst Clinical Translational Science Award (CTSA) Imaging Program in collaboration with the UT Southwestern CTSA Program

Learning Objectives

• to present current directions of quantitative imaging as a biomarker in clinical trials.
• to review the steps involved in the integration of an imaging biomarker into a multi-center clinical trial (protocol development, scanner qualification, standardization of image acquisition, data management, quality assurance, central review and analysis, validation, dissemination)
• to discuss examples of quantitative imaging best practice in PET/CT, MRI and pediatric imaging.

Instructors

• Author/Presenter: Jeffrey Yap, PhD
• Author/Presenter: Robert Lenkinski, PhD
• Author/Presenter: Simon Warfield, PhD

Logistics

• Wednesday, November 30, 2011
• Time: 4:30pm-6:00pm
• Location: Room S501ABC, McCormick Conference Center, Chicago, Illinois
  

Planning Log RSNA 2011 Planning

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