Difference between revisions of "2012 Summer Project Week:LongitudinalPETCTModule"

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<gallery>
 
<gallery>
 
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
 
Image:PW-MIT2012.png|[[2012_Summer_Project_Week#Projects|Projects List]]
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Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.
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Image:Long_PETCT_ImageSeriesSelection.png|1. Image Series Selection
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Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.
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Image:Long_PETCT_Registration-Automatic.png|1a. PET/CT Registration (automatic)
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Image:Long_PETCT_Registration-Manual.png|1a. PET/CT Registratoin (manual)
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Image:Long_PETCT_ROIs.png|2a. Regions of Interest
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Image:Long_PETCT_Segmentation.png|2b. Segmentation
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Image:Long_PETCT_Qualitative.png|3a. Qualitative Analysis
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Image:Long_PETCT_Quantitative.png|3b. Quantitative Analysis
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Image:Long_PETCT_ReportDialog.png|Report Dialog
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Image:Long_PETCT_ToolBox1.png|ToolBox approach example 1
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Image:Long_PETCT_ToolBox2.png|ToolBox approach example 2
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Image:Long_PETCT_Progress.jpg|Progress: Workflow Demo Application and OHLC plot for SUV
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==Instructions for Use of this Template==
 
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#Please create a new wiki page with an appropriate title for your project using the convention 2012_Winter_Project_Week:<Project Name>
 
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#Copy the entire text of this page into the page created above
 
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#Link the created page into the list of projects for the project event
 
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#Delete this section from the created page
 
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#Send an email to tkapur at bwh.harvard.edu if you are stuck
 
  
 
==Key Investigators==
 
==Key Investigators==
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<h3>Objective</h3>
 
<h3>Objective</h3>
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We are developing a loadable Slicer module which can be used for analysis of longitudinal PET/CT follow up examination image series. The focus is especially on maximizing the usability of the graphic user interface in order to make the whole process of selection and registeration of (multiple) image series, definition of regions of interests and evaluation of the results as accessible as possible. 
  
 
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<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
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1. Defining the constraints for this module (e.g. possibility of automatic CT-CT or PET-CT image registration, support of non PET/CT image series, etc.)
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2. Creating and evaluating mockups for the graphic user interface.
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3. Implementation of the module based on the results of the previous steps.
  
  
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<h3>Progress</h3>
 
<h3>Progress</h3>
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Discussed the initial mockups and compared steps of the workflow with other PET/CT analysis related project.
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Started to work on a "clickable" demo application based on some improvement decision taken at project week. We also made a request for a OHLC-plot extension to the available plot types in Slicer.
  
 
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==References==
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=== Download links ===
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* Opensource tool used for GUI prototyping: [http://pencil.evolus.vn/en-US/Home.aspx Pencil]

Latest revision as of 14:37, 22 June 2012

Home < 2012 Summer Project Week:LongitudinalPETCTModule

  • 1. Image Series Selection

  • 1a. PET/CT Registration (automatic)

  • 1a. PET/CT Registratoin (manual)

  • 2a. Regions of Interest

  • 2b. Segmentation

  • 3a. Qualitative Analysis

  • 3b. Quantitative Analysis

  • Report Dialog

  • ToolBox approach example 1

  • ToolBox approach example 2

  • Progress: Workflow Demo Application and OHLC plot for SUV

Key Investigators

  • University of Heidelberg: Paul Mercea
  • SPL: Paul Mercea, Andriy Fedorov, Ron Kikinis
  • University of Iowa: Christian Bauer, Reinhard Beichel, Markus Van Tol

Objective

We are developing a loadable Slicer module which can be used for analysis of longitudinal PET/CT follow up examination image series. The focus is especially on maximizing the usability of the graphic user interface in order to make the whole process of selection and registeration of (multiple) image series, definition of regions of interests and evaluation of the results as accessible as possible.

Approach, Plan

1. Defining the constraints for this module (e.g. possibility of automatic CT-CT or PET-CT image registration, support of non PET/CT image series, etc.)

2. Creating and evaluating mockups for the graphic user interface.

3. Implementation of the module based on the results of the previous steps.


Progress

Discussed the initial mockups and compared steps of the workflow with other PET/CT analysis related project. Started to work on a "clickable" demo application based on some improvement decision taken at project week. We also made a request for a OHLC-plot extension to the available plot types in Slicer.

Delivery Mechanism

This work will be delivered to the NA-MIC Kit as a (please select the appropriate options by noting YES against them below)

  1. Slicer Module
    1. Built-in
    2. Extension -- loadable


Download links

  • Opensource tool used for GUI prototyping: Pencil
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