Difference between revisions of "UKF Tractography in Slicer 4"
From NAMIC Wiki
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# Setup CTest and ensure its working. | # Setup CTest and ensure its working. | ||
# Verify that the Tractography module works on a test invivo data set | # Verify that the Tractography module works on a test invivo data set | ||
| − | + | ## Verify that the following 4 models work properly. | |
1-Tensor, 1-Tensor with Free-water, 2-tensor, 2-tensor with free-water. | 1-Tensor, 1-Tensor with Free-water, 2-tensor, 2-tensor with free-water. | ||
| − | + | # Design a logo for the extension module. | |
| − | + | # Document the module (including utility functions) -- make a wiki page. | |
(Include the References to the appropriate papers and make nice snapshots). | (Include the References to the appropriate papers and make nice snapshots). | ||
| − | + | # Add the 2 utility functions to the extension module and verify if they work. | |
* '''Optional''': | * '''Optional''': | ||
Revision as of 21:07, 4 January 2013
Home < UKF Tractography in Slicer 4
Key Investigators
- Ryan Eckbo, BWH, HMS
- Yogesh Rathi, BWH, HMS
- Demian Wassermann, BWH, HMS
- Carl-Fredrik Westin, BWH, HMS
Project Description
Objective
- High Priority:
Have a working UKFtractography module in Slicer4 extension:
- Change and update the UKFTractography.xml file for receiving a .vtk file as output.
- Setup CTest and ensure its working.
- Verify that the Tractography module works on a test invivo data set
## Verify that the following 4 models work properly.
1-Tensor, 1-Tensor with Free-water, 2-tensor, 2-tensor with free-water.
- Design a logo for the extension module.
- Document the module (including utility functions) -- make a wiki page.
(Include the References to the appropriate papers and make nice snapshots).
- Add the 2 utility functions to the extension module and verify if they work.
- Optional:
1. Use the VTK library to output the data (.vtp).
- Future Work:
1. Move from boost to ITK multithreading.
