Difference between revisions of "2013 Summer Project Week:WMQL Integration in Slicer"

From NAMIC Wiki
Jump to: navigation, search
 
(2 intermediate revisions by the same user not shown)
Line 12: Line 12:
  
 
<h3>Objective</h3>
 
<h3>Objective</h3>
Integrating the White Matter Query Language, a system for automatical definition and extraction of white matter tracts into 3D Slier
+
Integrating the White Matter Query Language, a system for automatical definition and extraction of white matter tracts into 3D Slicer
  
  
Line 35: Line 35:
  
 
<h3>Progress</h3>
 
<h3>Progress</h3>
 
+
The GUI and the loadable scripted module are in place. A python console needs to be implemented in order to provide access to the interactive features of the system
TBD
 
 
 
 
 
 
 
 
 
  
 
</div>
 
</div>
 
</div>
 
</div>
 
  
 
==Delivery Mechanism==
 
==Delivery Mechanism==
Line 53: Line 47:
 
==References==
 
==References==
 
*Wassermann, et al. "On Describing White Matter Anatomy", MICCAI 2013
 
*Wassermann, et al. "On Describing White Matter Anatomy", MICCAI 2013
 +
*[http://demianw.github.io/tract_querier WMQL Python implementation page]

Latest revision as of 12:40, 21 June 2013

Home < 2013 Summer Project Week:WMQL Integration in Slicer

Key Investigators

  • BWH: Demian Wassermann, Carl-Fredrik Westin

Objective

Integrating the White Matter Query Language, a system for automatical definition and extraction of white matter tracts into 3D Slicer



Approach, Plan

We already have a pure-python toolkit to perform this. The approach would be to integrate it as a python modules



Progress

The GUI and the loadable scripted module are in place. A python console needs to be implemented in order to provide access to the interactive features of the system

Delivery Mechanism

  1. Slicer Module
    1. Extension -- Python

References