Difference between revisions of "2014 Winter Project Week:Color Code Tables"
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Image:PW-SLC2014.png|[[2014_Winter_Project_Week#Projects|Projects List]] | Image:PW-SLC2014.png|[[2014_Winter_Project_Week#Projects|Projects List]] | ||
+ | Image:TMJErrorScalarInSlicer.jpg|New Red-Green-Blue color node in Slicer | ||
+ | Image:TMJErrorScalarInShapePopulation.jpg|Red-Green-Blue color table in ShapePopulationViewer | ||
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*** in the Models module, resetting the color table and active scalar is buggy | *** in the Models module, resetting the color table and active scalar is buggy | ||
*** in the Colors module, range is not updated to the scalar bar | *** in the Colors module, range is not updated to the scalar bar | ||
+ | ** Medium term Slicer to do list: | ||
+ | *** color transfer function gui element in the Colors module | ||
+ | *** procedural color node storage node | ||
+ | **** support csv and xml? | ||
+ | * Bug fixes in Slicer | ||
+ | ** [http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=22809 Models module Display Scalars] | ||
+ | ** [http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=22808 Model displayable manager] | ||
+ | * Enhancements to Slicer | ||
+ | ** [http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=22811 New red - green - blue continuous color node] | ||
+ | * To do: | ||
+ | ** investigate the volume rendering module color transfer widget and volume properties node and storage node and see how they can be used with the procedural color nodes | ||
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* Source code | * Source code | ||
− | ** [https://github.com/NIRALUser/3DMetricTools 3DMetricTools github] | + | ** [https://github.com/NIRALUser/ShapePopulationViewer Shape Population Viewer on github] |
+ | ** [https://github.com/NIRALUser/3DMetricTools 3DMetricTools on github] |
Latest revision as of 00:43, 10 January 2014
Home < 2014 Winter Project Week:Color Code TablesKey Investigators
- University of Michigan: Vinicius Boen
- University of North Carolina: Francois Budin
- BWH: Nicole Aucoin
- Isomics: Steve Pieper
Project Description
Objective
- Understand how the rendering is done in a stand alone tool (3DMeshMetric) that creates color-coded table for vtk files, in order to be able to update the stand alone tool to be part of the Slicer's extensions.
Approach, Plan
- Work in progress
Progress
- Discussion on Tuesday morning:
- looked at a vtk model with scalar overlay in Population Viewer and Slicer
- defining color mappings via point scalar value and an RGB
- Population Viewer uses an xml file format to save
- Slicer doesn't have a prodecural color node storage node
- identified some issues in Slicer:
- missing a red through green to blue continuous color table
- in the Models module, resetting the color table and active scalar is buggy
- in the Colors module, range is not updated to the scalar bar
- Medium term Slicer to do list:
- color transfer function gui element in the Colors module
- procedural color node storage node
- support csv and xml?
- Bug fixes in Slicer
- Enhancements to Slicer
- To do:
- investigate the volume rendering module color transfer widget and volume properties node and storage node and see how they can be used with the procedural color nodes