Difference between revisions of "2014 Summer Prioject Week:AgatstonScoring"
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Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | ||
Image:CardiacAgatstonModuleIamge.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Module]] | Image:CardiacAgatstonModuleIamge.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Module]] | ||
| + | Image:CardiacAgatstonMeasuresModuleScreenshot.jpg|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Extension]] | ||
| + | Image:CardiacAgatstonSlicerExtension.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Extension]] | ||
</gallery> | </gallery> | ||
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==Key Investigators== | ==Key Investigators== | ||
Jessica Forbes, | Jessica Forbes, | ||
| − | Hans Johnson | + | Hans Johnson, University of Iowa |
==Project Description== | ==Project Description== | ||
| − | A semi-automated method to segment and identify calcium plaques in coronary arteries to calculate the Agatston score. | + | A semi-automated method to segment and identify calcium plaques in coronary arteries in order to calculate the Agatston score (a measurement used to determine coronary artery disease and treatment). |
| + | |||
| + | '''Material for the Slicer 4.3.1 Agatston Score Module:''' | ||
| + | |||
| + | [[File:CardiacAgatstonMeasures TutorialContestSummer2014.zip]] | ||
| + | |||
| + | [[File:TutorialContest_CardiacAgatstonScoring_2014.pdf]] | ||
<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
| Line 18: | Line 26: | ||
* Segment calcium plaques | * Segment calcium plaques | ||
* Calculate a calcium score and label statistics | * Calculate a calcium score and label statistics | ||
| + | * Complete tutorial | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | * | + | * Threshold cardiac CT using minimum intensity threshold |
| + | * Use SimpleITK to calculate Agatston scores and label statists | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * Added the module as an extension to the Extension Manager in Slicer builds after 06-25-14 |
| + | * Mostly finished the extension tutorial | ||
| + | * Presented tutorial in the tutorial contest | ||
</div> | </div> | ||
</div> | </div> | ||
Latest revision as of 11:48, 27 June 2014
Home < 2014 Summer Prioject Week:AgatstonScoring
Key Investigators
Jessica Forbes, Hans Johnson, University of Iowa
Project Description
A semi-automated method to segment and identify calcium plaques in coronary arteries in order to calculate the Agatston score (a measurement used to determine coronary artery disease and treatment).
Material for the Slicer 4.3.1 Agatston Score Module:
File:CardiacAgatstonMeasures TutorialContestSummer2014.zip
File:TutorialContest CardiacAgatstonScoring 2014.pdf
Objective
- Segment calcium plaques
- Calculate a calcium score and label statistics
- Complete tutorial
Approach, Plan
- Threshold cardiac CT using minimum intensity threshold
- Use SimpleITK to calculate Agatston scores and label statists
Progress
- Added the module as an extension to the Extension Manager in Slicer builds after 06-25-14
- Mostly finished the extension tutorial
- Presented tutorial in the tutorial contest
