Difference between revisions of "T1 mapping for variable flip angle"
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Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]] | Image:PW-2015SLC.png|[[2015_Winter_Project_Week#Projects|Projects List]] | ||
| − | Image: | + | Image:T1_Mapping_New_UI.png | T1 Mapping UI |
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<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | * | + | * Create a Slicer module for T1 mapping for multiple flip angles using Python script |
| − | * | + | * Run Python script and [https://surfer.nmr.mgh.harvard.edu/fswiki/mri_ms_fitparms Freesurfer code] on [https://dblab.duhs.duke.edu/modules/QIBAcontent/index.php?id=1 QIBA T1 phantom] |
| + | * Test the Slicer module on MGH Brain Tumor MR Data with multiple flip angles | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
* Comparing the results using Python with Freesurfer and ground truth of T1 | * Comparing the results using Python with Freesurfer and ground truth of T1 | ||
| + | * T1 mapping results using Slicer+Python are almost identical to the Freesurfer results and comparable with the ground truth | ||
</div> | </div> | ||
</div> | </div> | ||
Revision as of 04:11, 9 January 2015
Home < T1 mapping for variable flip angle
T1 Mapping UI
Key Investigators
- MGH: Xiao Da, Artem Mamonov, Jayashree Kalpathy-Cramer
- BWH: Andriy Fedorov
Project Description
Objective
- Estimate effective T1 from multi-spectral FLASH MRI scans with different flip angles
Approach, Plan
- Create a Slicer module for T1 mapping for multiple flip angles using Python script
- Run Python script and Freesurfer code on QIBA T1 phantom
- Test the Slicer module on MGH Brain Tumor MR Data with multiple flip angles
Progress
- Comparing the results using Python with Freesurfer and ground truth of T1
- T1 mapping results using Slicer+Python are almost identical to the Freesurfer results and comparable with the ground truth
