Difference between revisions of "2015 Summer Project Week:LungCAD"
From NAMIC Wiki
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==Key Investigators== | ==Key Investigators== | ||
| − | * Jayender Jagadeesan | + | * Jayender Jagadeesan (BWH) |
| − | * Tobias Penskofer | + | * Tobias Penskofer (Charite, Berlin) |
| − | * Sandy Wells | + | * Sandy Wells (BWH) |
| − | * Clara Meiner | + | * Clara Meiner (previously BWH) |
| − | * Raul San Jose Estepar | + | * Raul San Jose Estepar (BWH) |
==Project Description== | ==Project Description== | ||
Revision as of 15:08, 24 June 2015
Home < 2015 Summer Project Week:LungCAD
Key Investigators
- Jayender Jagadeesan (BWH)
- Tobias Penskofer (Charite, Berlin)
- Sandy Wells (BWH)
- Clara Meiner (previously BWH)
- Raul San Jose Estepar (BWH)
Project Description
Objective
- Develop a module in 3D Slicer to segment the ground glass opacity (GGO) tumor, apply HeterogeneityCAD to obtain imaging metrics and classify the GGO.
- Provide the module as an extension part of OpenCAD
Approach, Plan
- Implement a simple region growing algorithm
- Apply HeterogeneityCAD module
- Use predetermined SVM classifier to decide the lesion type
Progress
- Completed analysis for 248 GGOs and trained SVM with an accuracy of 89% to classify GGOs
- Developed the framework for the LungCAD module in Slicer
- Evaluated the Lesion segmentation algorithm as part of the Chest Imaging Platform
- Segmentation works well and is able to prevent the segmentation of vessels running through the lesion
- LungCAD calls Lesion Segmentation CLI for segmentation and HeterogeneityCAD to evaluate features
- Pre-processed SVM will be utilized to classify the GGOs
