Difference between revisions of "2016 Winter Project Week/Projects/BatchImageAnalysis"

From NAMIC Wiki
Jump to: navigation, search
Line 17: Line 17:
 
==Project Description==
 
==Project Description==
 
{| class="wikitable"
 
{| class="wikitable"
 +
! style="text-align: left; width:27%" |  Objective
 +
! style="text-align: left; width:27%" |  Approach and Plan
 +
! style="text-align: left; width:27%" |  Progress and Next Steps
 
|- style="vertical-align:top;"
 
|- style="vertical-align:top;"
−
! style="text-align: left; width:27%" |       Objective
+
|
−
<!-- Add a bulleted list of key points -->
+
<!-- Objective bullet points -->
 
* Run feature detection code over a collection of medical images pulled from PACS
 
* Run feature detection code over a collection of medical images pulled from PACS
 
* Investigate a collection of ADC maps of neonates (diffusion MR)
 
* Investigate a collection of ADC maps of neonates (diffusion MR)
Line 25: Line 28:
 
* Use 3D SIFT code to see if health status can be detected in images
 
* Use 3D SIFT code to see if health status can be detected in images
 
* (if time) try text analysis of radiology reports
 
* (if time) try text analysis of radiology reports
−
 
+
|
−
! style="text-align: left; width:27%" |       Approach, Plan
 
 
<!-- Add a bulleted list of key points -->
 
<!-- Add a bulleted list of key points -->
 
* Use deidentified cohort of neonate images collected from MGH
 
* Use deidentified cohort of neonate images collected from MGH
Line 32: Line 34:
 
* Explore visualization options  
 
* Explore visualization options  
 
* (if time) integrate image features with analysis of radiology report text
 
* (if time) integrate image features with analysis of radiology report text
−
 
+
|
−
! style="text-align: left; width:27%" |     Progress
 
 
<!-- Fill this out at the end of Project Week; describe what you did this week and what you plan to do next -->
 
<!-- Fill this out at the end of Project Week; describe what you did this week and what you plan to do next -->
 
*
 
*
−
 
 
|}
 
|}

Revision as of 13:58, 24 December 2015

Home < 2016 Winter Project Week < Projects < BatchImageAnalysis

Key Investigators

  • Kalli Retzepi (MGH)
  • Yangming Ou (MGH)
  • Matt Toews (BWH)
  • Steve Pieper (BWH)
  • Sandy Wells (BWH)
  • Randy Gollub (MGH)

Project Description

Objective Approach and Plan Progress and Next Steps
  • Run feature detection code over a collection of medical images pulled from PACS
  • Investigate a collection of ADC maps of neonates (diffusion MR)
  • Patients labeled with age and health status (normal, mildly abnormal, severely abnormal)
  • Use 3D SIFT code to see if health status can be detected in images
  • (if time) try text analysis of radiology reports
  • Use deidentified cohort of neonate images collected from MGH
  • Install data and software on AWS, try StarCluster
  • Explore visualization options
  • (if time) integrate image features with analysis of radiology report text
Retrieved from "https://www.na-mic.org/w/index.php?title=2016_Winter_Project_Week/Projects/BatchImageAnalysis&oldid=91344"