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| − | [[Image:ProjectWeek-2007.png|thumb|right|250px|Return to [[2007_Programming/Project_Week_MIT|Project Week Main Page]] ]]
| + | __NOTOC__ |
| − | __TOC__
| + | <gallery> |
| | + | Image:PW-MIT2016.png|[[2016_Winter_Project_Week|Project Week Main Page]] |
| | + | </gallery> |
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| | + | ==Instructions for Use of this Template== |
| | + | #Please create a new wiki page with an appropriate title for your project using the convention Project/<Project Name> |
| | + | #Copy the entire text of this page into the page created above |
| | + | #Link the created page into the list of projects for the project event |
| | + | #Delete this section from the created page |
| | + | #Send an email to tkapur at bwh.harvard.edu if you are stuck |
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| − | See [[User:Pieper:FormatTest | this page for a format suggestion. ]]
| + | ==Key Investigators== |
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| | <div style="width: 27%; float: left; padding-right: 3%;"> | | <div style="width: 27%; float: left; padding-right: 3%;"> |
| − | <h1>Objective</h1>
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| − | We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.
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| | + | <h3>Objective</h3> |
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| | <div style="width: 27%; float: left; padding-right: 3%;"> | | <div style="width: 27%; float: left; padding-right: 3%;"> |
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| − | <h1>Approaches and Challenges </h1> | + | <h3>Approach, Plan</h3> |
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| − | Our approach for analyzing diffusion tensors is summarized in the IPMI 2007 reference below. The main challenge to this approach is <foo>.
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| | </div> | | </div> |
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| | <div style="width: 40%; float: left;"> | | <div style="width: 40%; float: left;"> |
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| − | <h1>Progress</h1> | + | <h3>Progress</h3> |
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| − | ====June 2007 (Project Week)====
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| − | This is where you put in progress made in Project Week 2007.
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| − | ====January 2007====
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| − | Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version (MEDIA 2006). Our recent IPMI 2007 paper includes a nonparametric regression method for analyzing data along a fiber tract.
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| − | </div>
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| − | <br style="clear: both;" />
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| − | </div>
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| − | ===Publications===
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| − | * Fletcher, P.T., Tao, R., Jeong, W.-K., Whitaker, R.T., "A Volumetric Approach to Quantifying Region-to-Region White Matter Connectivity in Diffusion Tensor MRI," to appear Information Processing in Medical Imaging (IPMI) 2007.
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| − | * Corouge, I., Fletcher, P.T., Joshi, S., Gilmore, J.H., and Gerig, G., "Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis," Medical Image Analysis 10 (2006), 786--798.
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| − | * Corouge, I., Fletcher, P.T., Joshi, S., Gilmore J.H., and Gerig, G., Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis, Lecture Notes in Computer Science LNCS, James S. Duncan and Guido Gerig, editors, Springer Verlag, Vol. 3749, Oct. 2005, pp. 131 -- 138
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| − | * C. Goodlett, I. Corouge, M. Jomier, and G. Gerig, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .
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| − | ===Key Investigators===
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| − | * UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig
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| − | * Utah: Tom Fletcher, Ross Whitaker
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| − | ===Representative Images===
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| − | * [[Progress_Report:Diffusion_Tensor_Statistics|Diffusion Tensor Statistics Progress Report]]
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| − | {|
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| − | |[[Image:genuFAp.jpg|thumb|320px|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.]]
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| − | |[[Image:genuFA.jpg|thumb|320px|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.]]
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| − | |}
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| − | ===Additional Links===
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| − | This is where you can put in additional links either on this wiki our outside that provide details of this project.
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| − | =Testing Out a format=
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| − | __NOTOC__
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| − | <div style="margin: 20px;">
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| − | <div style="width: 30%; float: left; padding-right: 3%;">
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| − | <h1>Objective</h1>
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| − | [[More on the objective]]
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| − | </div>
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| − | <div style="width: 30%; float: left; padding-right: 3%;">
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| − | <h1>Approach and Challenges </h1>
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| − | [[More on Approach and Challenges »]]
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| − | </div>
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| − | <div style="width: 30%; float: left;">
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| − | <h1>Results</h1>
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| − | [[Results|More on Results»]]
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| − | </div>
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| − | <br style="clear: both;" />
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| − | <div style="text-align: left; width: 30%; float: left; padding-right: 3%;">
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| − | <h1>Announcements </h1>
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| − | [http://www.linux-foundation.org/wordpress/?cat=9 More Announcements »]
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| | </div> | | </div> |
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| − | <div style="text-align: left; width: 30%; float: left; padding-right: 3%;">
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| − | <h1>News</h1>
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| − | [http://www.linux-foundation.org/wordpress/?cat=8 More News »]
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| | </div> | | </div> |
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| − | <div style="text-align: left; width: 30%; float: left; padding-right: 3%;">
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| − | <h1>Blogs</h1>
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| − | [http://www.linux-foundation.org/blogs/ More Blogs »]
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| − | </div>
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| − | <br style="clear: both;" />
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| − | </div>
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| − | Based on format at http://www.linux-foundation.org/.
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| − | == A table created in google docs ==
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| − | http://docs.google.com/View?docid=dhh84kfj_0cddfnx&revision=_published
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| − | <br/> <br/> Can it have a table in it? Maybe so...:<br/> <br/> <div align="center"> <table border="1" bordercolor="#999900" cellpadding="3" cellspacing="0" style="WIDTH:616px; HEIGHT:50px"> <tbody> <tr> <td bgcolor="#ccccff" width="50%"> <span style="COLOR:#000099">Days</span><br/> </td> <td width="50%"> Weeks<br/> </td> </tr> <tr> <td width="50%"> Short<br/> </td> <td align="center" bgcolor="#cccccc" width="50%"> Long<br/> </td> </tr> </tbody> </table> </div> <br/>
| + | ==References== |
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