Difference between revisions of "2017 Winter Project Week/GeodesicSegmentationandLungtumorAnalysis"
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==Key Investigators== | ==Key Investigators== | ||
| − | + | * Patmaa Sridharan - UPenn CBICA | |
| − | + | * Andras Lasso | |
| − | + | * Louise Oram | |
| − | * Patmaa | ||
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==Project Description== | ==Project Description== | ||
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<!-- Objective bullet points --> | <!-- Objective bullet points --> | ||
| − | Integrate two | + | Integrate two applications listed below with slicer and also focus on interaction between Slicer and CAPTk(our internal tool) |
* Geodesic Segmentation | * Geodesic Segmentation | ||
A generic segmentation algorithm that uses geodesic distances. | A generic segmentation algorithm that uses geodesic distances. | ||
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<!-- Approach and Plan bullet points --> | <!-- Approach and Plan bullet points --> | ||
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| − | <!-- Progress and Next steps bullet points | + | *Analyze the compatibility between the dependencies of our code with that of Slicer and solve it for smooth interaction with our application. |
| − | * | + | *Enabling Slicer's GUI to provide seed point initialization required for our application. |
| + | *Do a code level integration of geodesic segmentation and SBRT with Slicer. | ||
| + | *Investigate on possibility of calling Slicer from CapTk and vice-versa by using pre-populated project files. | ||
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| + | <!-- Progress and Next steps bullet points --> | ||
| + | * Had discussions on how to get CAPTk and Slicer communicate and get to use some of the applications of Slicer from CapTk | ||
| + | * On process of getting geodesic segmentation into a Slicer plugin. | ||
| + | * Next Steps | ||
| + | * Finish the plugin and submit it for adding as a module | ||
| + | * Finish the OpenIGT linking to CAPTk to enable both applications communicate | ||
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==Background and References== | ==Background and References== | ||
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | <!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | ||
Latest revision as of 18:56, 13 January 2017
Home < 2017 Winter Project Week < GeodesicSegmentationandLungtumorAnalysis
Key Investigators
- Patmaa Sridharan - UPenn CBICA
- Andras Lasso
- Louise Oram
Project Description
| Objective | Approach and Plan | Progress and Next Steps |
|---|---|---|
|
Integrate two applications listed below with slicer and also focus on interaction between Slicer and CAPTk(our internal tool)
A generic segmentation algorithm that uses geodesic distances.
Segmentation of lung tumor from multimodal images- CT and PET using initial seed points. Analyze the segmented region using texture features and predict the nodal failure in lung. |
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