Difference between revisions of "Project Week 25/DICOM for Quantitative Imaging and Integration with Processing Applications"
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Back to [[Project_Week_25#Projects|Projects List]] | Back to [[Project_Week_25#Projects|Projects List]] | ||
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==Key Investigators== | ==Key Investigators== | ||
<!-- Key Investigator bullet points --> | <!-- Key Investigator bullet points --> | ||
− | * [https://www.dkfz.de/en/mic/team/people/Marco_Nolden.html Marco Nolden] (DKFZ, Germany) | + | * [https://www.dkfz.de/en/mic/team/people/Marco_Nolden.html Marco Nolden] (German Cancer Research Center (DKFZ), Germany) |
− | * [https://www.dkfz.de/en/mic/team/people/Jasmin_Metzger.html Jasmin Metzger] (DKFZ, Germany) | + | * [https://www.dkfz.de/en/mic/team/people/Jasmin_Metzger.html Jasmin Metzger] (German Cancer Research Center (DKFZ), Germany) |
− | * [http://www.spl.harvard.edu/pages/People/pieper Steve Pieper ] (Isomics Inc., USA) | + | * [http://www.spl.harvard.edu/pages/People/pieper Steve Pieper] (Isomics Inc., USA) |
− | * [ | + | * [https://fedorov.github.io Andrey Fedorov](remote) (Brigham and Women's Hospital, Harvard Medical School, USA) |
+ | * [https://www.kitware.com/jean-christophe-fillion-robin/ Jean-Christophe Fillion-Robin] (Kitware, Inc., USA) | ||
==Project Description== | ==Project Description== | ||
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** DICOM Segmentation (SEG) objects | ** DICOM Segmentation (SEG) objects | ||
** DICOM Parametric map (PM) objects | ** DICOM Parametric map (PM) objects | ||
+ | ** Interoperability (Slicer, MITK, XNAT, Web Viewers) | ||
+ | ** Interaction with processing algorithms and pipelines (CLI, Docker) | ||
+ | ** Integration with databases (CTK DICOM Database, Elasticsearch, Postgres/XNAT) | ||
|<!-- Approach and Plan bullet points --> | |<!-- Approach and Plan bullet points --> | ||
+ | * Fix packaging issues of dcmqi (see [https://github.com/QIICR/dcmqi/issues/260 dcmqi issue #260]) | ||
+ | * Create examples of interoperability with pipelines and databases | ||
* Preparing the satellite event at MICCAI 2017 | * Preparing the satellite event at MICCAI 2017 | ||
+ | |||
|<!-- Progress and Next steps (fill out at the end of project week), bullet points --> | |<!-- Progress and Next steps (fill out at the end of project week), bullet points --> | ||
+ | * Many discussions about detailed implementation and use | ||
+ | * Prototyping with cornerstone/slicer/dcmqi/mitk integration | ||
+ | |||
+ | Next steps: | ||
+ | * Load SR in MITK and finalize interoperability demonstration for MICCAI and RSNA | ||
|} | |} | ||
==Illustrations== | ==Illustrations== | ||
− | + | <gallery heights=400px mode="packed"> | |
− | + | Image:DICOM_QI_Slicer-read-td4.png|Slicer | |
− | + | Image:DICOM_QI_MITK_td4-read-prostate.png|MITK | |
+ | </gallery> | ||
<!--<embedvideo service="youtube">https://www.youtube.com/watch?v=MKLWzD0PiIc</embedvideo>--> | <!--<embedvideo service="youtube">https://www.youtube.com/watch?v=MKLWzD0PiIc</embedvideo>--> | ||
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* [http://qiicr.org/dicom4miccai/ Tutorial satellite event at MICCAI 2017 DICOM4MICCAI] | * [http://qiicr.org/dicom4miccai/ Tutorial satellite event at MICCAI 2017 DICOM4MICCAI] | ||
* [https://github.com/QIICR/dcmqi dcmqi] - tools to convert image analysis results into DICOM objects | * [https://github.com/QIICR/dcmqi dcmqi] - tools to convert image analysis results into DICOM objects | ||
+ | * [http://qiicr.org/dcmqi-guide/tutorials/intro.html dcmqi self-guided video tutorials] | ||
+ | * [https://qiicr.gitbooks.io/dicom4qi DICOM4QI: DICOM for Quantitative Imaging demonstration and connectathon at RSNA] |
Latest revision as of 12:36, 30 June 2017
Home < Project Week 25 < DICOM for Quantitative Imaging and Integration with Processing Applications
Back to Projects List
Key Investigators
- Marco Nolden (German Cancer Research Center (DKFZ), Germany)
- Jasmin Metzger (German Cancer Research Center (DKFZ), Germany)
- Steve Pieper (Isomics Inc., USA)
- Andrey Fedorov(remote) (Brigham and Women's Hospital, Harvard Medical School, USA)
- Jean-Christophe Fillion-Robin (Kitware, Inc., USA)
Project Description
Objective | Approach and Plan | Progress and Next Steps |
---|---|---|
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Next steps:
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Illustrations
Background and References
- Tutorial satellite event at MICCAI 2017 DICOM4MICCAI
- dcmqi - tools to convert image analysis results into DICOM objects
- dcmqi self-guided video tutorials
- DICOM4QI: DICOM for Quantitative Imaging demonstration and connectathon at RSNA