Difference between revisions of "Particle UNC Utah"
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== Introduction == | == Introduction == | ||
| − | This training seminar has as major goal keep the scientific community up-to-date with the latest extensions of [ | + | This training seminar has as major goal keep the scientific community up-to-date with the latest extensions of [http://www.nitrc.org/projects/shapeworks ShapeWorks], and with practical information of usage, potential applications, and future development. |
==Date== | ==Date== | ||
| Line 12: | Line 12: | ||
==Outline == | ==Outline == | ||
| − | + | # Basic particle correspondence review | |
| − | + | #Extensions | |
| + | ##Generalized correspondence | ||
| + | ##Adaptive sampling | ||
| + | ##Geodesic distances | ||
| + | ##Normal consistency | ||
| + | ##Open surfaces | ||
| + | ##Multi-object complexes | ||
| + | ##Regression | ||
| + | #Initialization methods | ||
| + | #Applications | ||
| + | #Open discusion | ||
| + | #Future work | ||
==Location== | ==Location== | ||
| Line 23: | Line 34: | ||
==Talk contents(ppt)== | ==Talk contents(ppt)== | ||
| + | [https://na-mic.org/w/images/7/72/ShapeStatsParticles_Oguz_Paniagua.pdf Slides] | ||
==Other Resources== | ==Other Resources== | ||
| + | * Combined SPHARM-PDM and entropybased particle systems shape correspondence methodology, B Paniagua, L Bompard, J Cates, RT Whitaker, M Datar, C Vachet, MA Styner, SPIE Medical Imaging (SPIE 2012) | ||
| + | * Group-wise Automatic Mesh-based Analysis of Cortical Thickness, Vachet, C., Hazlett, H., Niethammer, M., Oguz, I., Cates, J., Whitaker, R., Piven, J., Styner, M., Proc. SPIE 2011 | ||
| + | * Geometric correspondence for ensembles of nonregular shapes. M Datar, Y Gur, B Paniagua, M Styner et al. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2011 (2011) | ||
| + | * Particle based shape regression of open surfaces with applications to developmental neuroimaging. M Datar, J Cates, P Fletcher, S Gouttard, G Gerig, R Whitaker. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009 (2009) pp. 167-174 | ||
| + | * Particle based shape regression of open surfaces with applications to developmental neuroimaging. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009 (2009) pp: 167–174. | ||
| + | * Particle-based shape analysis of multi-object complexes. J Cates, P Fletcher, M Styner, H Hazlett. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2008 (2008) | ||
| + | * Cortical correspondence using entropy-based particle systems and local features. I Oguz, J Cates, T Fletcher, R Whitaker, D Cool, S Aylward, M Styner. Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on DOI - 10.1109/ISBI.2008.4541327 (2008) pp. 1637-1640 | ||
| + | * Shape modeling and analysis with entropy-based particle systems. J Cates, PT Fletcher, M Styner, M Shenton, R Whitaker. Lecture Notes in Computer Science (2007) vol. 4584 pp. 333 | ||
| + | * Entropy-based particle systems for shape correspondence. J Cates, PT Fletcher, R Whitaker. MICCAI Workshop Mathematical Foundations of Computational Anatomy (2006) pp. 90-99 | ||
| + | * Robust particle systems for curvature dependent sampling of implicit surfaces. M Meyer, P Georgel, R Whitaker. Shape Modeling and Applications, 2005 International Conference (2005) pp. 124 - 133 | ||
| + | * [https://gforge.sci.utah.edu/gf/download/frsrelease/107/159/ShapeWorksManual.pdf ShapeWorks user manual] | ||
== Particle Community == | == Particle Community == | ||
Latest revision as of 18:27, 10 July 2017
Home < Particle UNC Utah
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Contents
Introduction
This training seminar has as major goal keep the scientific community up-to-date with the latest extensions of ShapeWorks, and with practical information of usage, potential applications, and future development.
Date
Shape and Stats seminar series March 16th, 2012 3pm - 4pm
Outline
- Basic particle correspondence review
- Extensions
- Generalized correspondence
- Adaptive sampling
- Geodesic distances
- Normal consistency
- Open surfaces
- Multi-object complexes
- Regression
- Initialization methods
- Applications
- Open discusion
- Future work
Location
Talk will be held at Sitterson Hall, room 248 in the University of North Carolina at Chapel Hill campus, Chapel Hill (NC)
Presenters
- Ipek Oguz, Ph.D., University of North Carolina at Chapel Hill
- Beatriz Paniagua, Ph.D., University of North Carolina at Chapel Hill
Talk contents(ppt)
Other Resources
- Combined SPHARM-PDM and entropybased particle systems shape correspondence methodology, B Paniagua, L Bompard, J Cates, RT Whitaker, M Datar, C Vachet, MA Styner, SPIE Medical Imaging (SPIE 2012)
- Group-wise Automatic Mesh-based Analysis of Cortical Thickness, Vachet, C., Hazlett, H., Niethammer, M., Oguz, I., Cates, J., Whitaker, R., Piven, J., Styner, M., Proc. SPIE 2011
- Geometric correspondence for ensembles of nonregular shapes. M Datar, Y Gur, B Paniagua, M Styner et al. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2011 (2011)
- Particle based shape regression of open surfaces with applications to developmental neuroimaging. M Datar, J Cates, P Fletcher, S Gouttard, G Gerig, R Whitaker. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009 (2009) pp. 167-174
- Particle based shape regression of open surfaces with applications to developmental neuroimaging. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009 (2009) pp: 167–174.
- Particle-based shape analysis of multi-object complexes. J Cates, P Fletcher, M Styner, H Hazlett. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2008 (2008)
- Cortical correspondence using entropy-based particle systems and local features. I Oguz, J Cates, T Fletcher, R Whitaker, D Cool, S Aylward, M Styner. Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on DOI - 10.1109/ISBI.2008.4541327 (2008) pp. 1637-1640
- Shape modeling and analysis with entropy-based particle systems. J Cates, PT Fletcher, M Styner, M Shenton, R Whitaker. Lecture Notes in Computer Science (2007) vol. 4584 pp. 333
- Entropy-based particle systems for shape correspondence. J Cates, PT Fletcher, R Whitaker. MICCAI Workshop Mathematical Foundations of Computational Anatomy (2006) pp. 90-99
- Robust particle systems for curvature dependent sampling of implicit surfaces. M Meyer, P Georgel, R Whitaker. Shape Modeling and Applications, 2005 International Conference (2005) pp. 124 - 133
Particle Community
- Josh Cates ( cates_AT_sci.utah.edu )
- Ross Whitaker ( whitaker_AT_sci.utah.edu )
- Manasi Datar ( datar_AT_sci.utah.edu )
- Tom Fletcher ( fletcher_AT_sci.utah.edu )
- Martin Styner ( styner_AT_cs.unc.edu )
- Clement Vachet ( cvachet_AT_unc.edu, soon will move to Utah)
- Ipek Oguz ( ipek_AT_cs.unc.edu )
- Beatriz Paniagua ( beatriz_paniagua_AT_med.unc.edu )
- NA-MIC ( http://www.na-mic.org/ )
