Difference between revisions of "User:Davisb"
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==Rule Based Segmentation== | ==Rule Based Segmentation== | ||
− | Status summary | + | ===Status summary=== |
+ | Code is debugged, wrapper works | ||
− | + | itk tests work; fixed vtk wrapper; added mask code to vtk wrapper; vtk tests work | |
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− | + | ===How to build module=== | |
− | + | *get cvs copy of slicer2 | |
− | + | **Scripts/genlib.tcl | |
− | + | **Scripts/cmaker.tcl | |
+ | *get svn copy of NAMICSandbox | ||
+ | *create a link to the RuleBasedSegmentation module within slicer2 | ||
cd slicer2/Modules | cd slicer2/Modules | ||
ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation | ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation | ||
− | + | *compile slicer2 with RuleBasedSegmentation module | |
− | + | **Scripts/genlib.tcl | |
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− | Problems | + | ===Problems=== |
*[fixed]Build fails---updated name in cmakelists | *[fixed]Build fails---updated name in cmakelists | ||
− | + | *[now working] vtk test does not work---subtle templating error (false assumption) in itk code | |
− | + | *images must be flipped between vtk reader/writers and itk pipeline (how many dimensions?) | |
− | + | *there was a problem with readers and writers for unsigned long data type, changed to unsigned short | |
− | *[now working] vtk test does not work---subtle error in itk code | ||
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Latest revision as of 23:26, 6 May 2007
Contents
Current Projects
Rule Based Segmentation
Status summary
Code is debugged, wrapper works
itk tests work; fixed vtk wrapper; added mask code to vtk wrapper; vtk tests work
How to build module
- get cvs copy of slicer2
- Scripts/genlib.tcl
- Scripts/cmaker.tcl
- get svn copy of NAMICSandbox
- create a link to the RuleBasedSegmentation module within slicer2
cd slicer2/Modules ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation
- compile slicer2 with RuleBasedSegmentation module
- Scripts/genlib.tcl
Problems
- [fixed]Build fails---updated name in cmakelists
- [now working] vtk test does not work---subtle templating error (false assumption) in itk code
- images must be flipped between vtk reader/writers and itk pipeline (how many dimensions?)
- there was a problem with readers and writers for unsigned long data type, changed to unsigned short