Difference between revisions of "NA-MIC-kit-curriculum"
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=Introduction= | =Introduction= | ||
This curriculum is intended as an introduction for scientists with engineering background who are considering using the NA-MIC kit as their software platform for research. The NA-MIC kit consists of free open source software without restrictions on use and without a give-back requirement. The NA-MIC kit is suited for academic or commercial activities. | This curriculum is intended as an introduction for scientists with engineering background who are considering using the NA-MIC kit as their software platform for research. The NA-MIC kit consists of free open source software without restrictions on use and without a give-back requirement. The NA-MIC kit is suited for academic or commercial activities. | ||
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=Program= | =Program= | ||
| − | * Slicer 3 | + | * [[media:2008_NA-MIC_AHM_Slicer3.ppt|Slicer 3 capabilities]] |
| − | ** Loading, Visualization | + | ** [[Media:Slicer3Training LoadingAndVisualization.ppt|Loading, Visualization]] |
| + | ** [https://www.slicer.org/wiki/Slicer3:EM#Old_.282007.29_Tutorial The EM segmenter in Slicer] | ||
* Engineering methodology: | * Engineering methodology: | ||
| + | ** Extreme programming | ||
| + | ** [[NA-MIC-kit-curriculum/Testing-Based Programming|Testing-Based Programming]] | ||
** What is a software engineering methodology, do I need one? | ** What is a software engineering methodology, do I need one? | ||
| − | + | ** The components of the NA-MIC kit software engineering tools: CMAKE, CTEST, CPACK, Dashboards | |
| − | ** The components of the NA-MIC kit software engineering | ||
* ITK, VTK, batchmake introduction | * ITK, VTK, batchmake introduction | ||
| − | ** VTK | + | ** [http://public.kitware.com/VTK/index.php VTK] |
| − | ** ITK | + | ** [http://www.itk.org/ItkSoftwareGuide.pdf ITK] |
| − | ** Batchmake | + | ** [[Media:NA-MIC-AHM08-BatchMake.ppt|Batchmake]] |
| − | ** XNAT | + | ** [http://www.xnat.org XNAT] |
| − | * Slicer 3 architecture | + | * [[media:Slicer_3-beta-2007-01-10.ppt|Slicer 3 architecture]] |
* Plug-ins for Slicer 3 | * Plug-ins for Slicer 3 | ||
** Introduction: Plug-ins as a way to interface external programs | ** Introduction: Plug-ins as a way to interface external programs | ||
| − | ** How-to make a hello world plug-in | + | ** [[2008_Winter_Project_Week_Plug-ins_for_Slicer3|How-to make a hello world plug-in]] |
| + | ** Segmentation in Slicer using a plug-in based on ITK | ||
* Slicer 3 IGT capabilities | * Slicer 3 IGT capabilities | ||
| + | ** workflow engine | ||
| + | ** real-time behavior | ||
| + | ** Slicer demon | ||
| + | ** i/o to trackers, devices, and scanners | ||
| + | ** [[LEGO_IGT_and_Medical_Robotics_Tutorial|Lego robot tutorial]] | ||
Latest revision as of 18:07, 10 July 2017
Home < NA-MIC-kit-curriculumIntroduction
This curriculum is intended as an introduction for scientists with engineering background who are considering using the NA-MIC kit as their software platform for research. The NA-MIC kit consists of free open source software without restrictions on use and without a give-back requirement. The NA-MIC kit is suited for academic or commercial activities.
The curriculum provides an overview over the technologies, toolkits and applications which are available in the NA-MIC kit. It is a hands-on curriculum and will require participants to attend with a suitable laptop, preloaded with software and sample data. A working knowledge of C++ is a prerequisite for benefitting from the full curriculum.
Program
- Slicer 3 capabilities
- Engineering methodology:
- Extreme programming
- Testing-Based Programming
- What is a software engineering methodology, do I need one?
- The components of the NA-MIC kit software engineering tools: CMAKE, CTEST, CPACK, Dashboards
- ITK, VTK, batchmake introduction
- Slicer 3 architecture
- Plug-ins for Slicer 3
- Introduction: Plug-ins as a way to interface external programs
- How-to make a hello world plug-in
- Segmentation in Slicer using a plug-in based on ITK
- Slicer 3 IGT capabilities
- workflow engine
- real-time behavior
- Slicer demon
- i/o to trackers, devices, and scanners
- Lego robot tutorial
