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| − | == Summary Page ==
| + | <big>'''Note:''' We are migrating this content to the slicer.org domain - <font color="orange">The newer page is [https://www.slicer.org/wiki/Slicer3:Transition_of_Slicer2.x_Modules here]</font></big> |
| − | | |
| − | [[AHM_2006:ProjectsSlicerModuleTransition|Goal/Questions/Answers slide from AHM 2006]]
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| − | | |
| − | == Plan of Attack ==
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| − | | |
| − | In Slicer2:
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| − | | |
| − | * [[Slicer:Slicer2_Porting_to_VTK5|Slicer:Slicer2_Porting_to_VTK5]]
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| − | ** Compiling with changes to the C++ code, maintaining backward compatibility with VTK 4.x and Slicer 2
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| − | ** Editing the Tcl interface to work with the ported C++ code
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| − | ** Write test cases to define the gold standard we will compare Slicer3 against see [[Slicer3:Transition_Testing|[1]]]
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| − | | |
| − | In Slicer3:
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| − | | |
| − | * Port the threads of control in the modules from Tcl to C++
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| − | * Dynamic discovery and loading of modules
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| − | * Write a template for a Slicer3 module [[Slicer3:Transition_of_Slicer2.x_Modules:Template_Notes|Template Notes]]
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| − | ** Illustrate coding and documentation standards and style
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| − | * Write test templates in C++ and tcl
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| − | ** Will have different styles of tests, some that render images and some that produce numerical output, one template for each
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| − | | |
| − | Done:
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| − | | |
| − | * [[2006_Project_Week_MIT_Migrating_Slicer2.x_Modules_to_Slicer3|ModelMaker]]
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| − | | |
| − | In Progress:
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| − | | |
| − | * [[Slicer3:Transition_of_Slicer2.x_Modules:Fiducials|Fiducials]]
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| − | | |
| − | == Preliminary Notes ==
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| − | | |
| − | * Focus on the data handling first, not the UI
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| − | ** Each module expects to be handed a frame to populate
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| − | ** Call the new data model functions
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| − | ** Replace global arrays with the new data model
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| − | ** The data model can be quiered by pipes or shared memory, but the API will be C++
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| − | * Try to come up with a semi automatic translation method
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| − | * First modules to transition:
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| − | ** Kilians segmenter
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| − | ** Ibrowser
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| − | ** fMRI engine
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| − | ** DTI engine
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| − | * TBD:
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| − | ** List all the modules and rate difficulty in transition, UI vs data level
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| − | ** Migrate old mrml into new coordinate manager space
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| − | *** Look at the ITK visitor functionality to traverse a tree and get transforms
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| − | *** xpath
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| − | | |
| − | == List of Modules ==
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| − | | |
| − | '''Currently in Base'''
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| − | | |
| − | * Alignments.tcl
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| − | * Anatomy.tcl
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| − | * Anno.tcl
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| − | * Colors.tcl
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| − | * CrossSection.tcl
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| − | * Custom.tcl
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| − | * CustomCsys.tcl
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| − | * Data.tcl
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| − | * Editor/
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| − | ** EdChangeIsland.tcl
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| − | ** EdChangeLabel.tcl
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| − | ** EdDraw.tcl
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| − | ** EdDraw2.tcl
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| − | ** EdErode.tcl
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| − | ** EdIdentifyIslands.tcl
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| − | ** EdLabelVOI.tcl
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| − | ** EdMeasureIsland.tcl
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| − | ** EdNone.tcl
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| − | ** EdPhaseWire.tcl
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| − | ** EdRemoveIslands.tcl
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| − | ** EdSaveIsland.tcl
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| − | ** EdThreshold.tcl
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| − | * Editor.tcl
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| − | * Endoscopic.tcl
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| − | * Fiducials.tcl
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| − | * Guidance.tcl
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| − | * Locator.tcl
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| − | * Measure.tcl
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| − | * MeasureVol.tcl
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| − | * ModelCompare.tcl
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| − | * ModelHierarchy.tcl
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| − | * ModelMaker.tcl
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| − | * Models.tcl
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| − | * Navigator.tcl
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| − | * Options.tcl
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| − | * OsteoPlan.tcl
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| − | * PathPlanning.tcl
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| − | * Realtime.tcl
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| − | * SessionLog.tcl
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| − | * Slices.tcl
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| − | * Tester.tcl
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| − | * TetraMesh.tcl
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| − | * TwinDisplay.tcl
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| − | * View.tcl
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| − | * VolRend.tcl
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| − | * VolumeMath.tcl
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| − | * Volumes/
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| − | ** VolBasic.tcl
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| − | ** VolDicom.tcl
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| − | ** VolHeader.tcl
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| − | ** VolTensor.tcl
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| − | * Volumes.tcl
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| − | | |
| − | <br />'''Currently in Modules''' | |
| − | | |
| − | Tcl and Cxx code:
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| − | | |
| − | * BIRNDUP
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| − | * LDMMViewer
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| − | * MultiVolumeReader
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| − | * iSlicer
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| − | * vtkAG
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| − | * vtkAffineSegment
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| − | * vtkAnalyze
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| − | * vtkBXH
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| − | * vtkCISGFile
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| − | * vtkCompareModule
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| − | * vtkCorCTA
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| − | * vtkDTMRI
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| − | * vtkEMAtlasBrainClassifier
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| − | * vtkEMLocalSegment
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| − | * vtkEditorGeometryDraw
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| − | * vtkFMRIEngine
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| − | * vtkFSLReader
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| − | * vtkFastMarching
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| − | * vtkFluxDiffusion
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| − | * vtkFreeSurferReaders
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| − | * vtkITK
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| − | * vtkIbrowser
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| − | * vtkImageSmooth
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| − | * vtkLevelSets
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| − | * vtkMorphometrics
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| − | * vtkNormalize
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| − | * vtkQueryAtlas
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| − | * vtkRealignResample
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| − | * vtkRigidIntensityRegistration
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| − | * vtkTeem
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| − | * vtkTensorUtil
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| − | * vtkVolumeTextureMapping
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| − | | |
| − | Only tcl code:
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| − | | |
| − | {| border="1"
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| − | ! Module Name
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| − | ! Notes
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| − | |-
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| − | | vtkTransformVolume
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| − | |-
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| − | | vtkSiemensMosaicReader
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| − | |-
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| − | | vtkSubVolume
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| − | |-
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| − | | vtkMIRIADSegment
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| − | |-
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| − | | vtkCustomModule
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| − | |}
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| − | | |
| − | <br /> [[Slicer3|Back to Slicer 3.0]]] | |
