Difference between revisions of "2010 Winter Project Week LongitudinalLupusAnalyses"

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Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]
 
Image:PW-SLC2010.png|[[2010_Winter_Project_Week#Projects|Projects List]]
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Image:genuFAp.jpg|Scatter plot of the original FA data through the genu of the corpus callosum of a normal brain.
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Image:CompareViewFlairLesionDiffWholeBrain.png|Flair with lesion diff.
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Image:genuFA.jpg|Regression of FA data; solid line represents the mean and dotted lines the standard deviation.
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Image:CompareViewFlairLesionDiff.png|Lesions Time1 Vs. Time2
 
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Improve support for longitudinal analysis of lesion data.
  
  
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<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
  
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'''1.''' Meet with Andriy Fedorov and go over existing Change Tracker codebase and determine whether it can be adapted and if not, what elements can be reused.
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'''2.''' Incorporate our current approach into Change Tracker or Re-Use elements of Change Tracker in a new longitudinal lesion analysis tool.
  
 
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<h3>Progress</h3>
 
<h3>Progress</h3>
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'''1.''' Created a pipeline for longitudinal segmentation.
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'''2.''' Created a module to produce lesion change maps.
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==References==
 
==References==
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*Fletcher P, Tao R, Jeong W, Whitaker R. [http://www.na-mic.org/publications/item/view/634 A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI.] Inf Process Med Imaging. 2007;20:346-358. PMID: 17633712.
 
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* Corouge I, Fletcher P, Joshi S, Gouttard S, Gerig G. [http://www.na-mic.org/publications/item/view/292 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Med Image Anal. 2006 Oct;10(5):786-98. PMID: 16926104.
 
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* Corouge I, Fletcher P, Joshi S, Gilmore J, Gerig G. [http://www.na-mic.org/publications/item/view/1122 Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.] Int Conf Med Image Comput Comput Assist Interv. 2005;8(Pt 1):131-9. PMID: 16685838.
 
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* Goodlett C, Corouge I, Jomier M, Gerig G, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .
 
  
 
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Latest revision as of 15:40, 8 January 2010

Home < 2010 Winter Project Week LongitudinalLupusAnalyses

Key Investigators

  • MRN: Mark Scully, Jeremy Bockholt
  • BWH: Steve Pieper

Objective


Improve support for longitudinal analysis of lesion data.



Approach, Plan

1. Meet with Andriy Fedorov and go over existing Change Tracker codebase and determine whether it can be adapted and if not, what elements can be reused.

2. Incorporate our current approach into Change Tracker or Re-Use elements of Change Tracker in a new longitudinal lesion analysis tool.

Progress

1. Created a pipeline for longitudinal segmentation.

2. Created a module to produce lesion change maps.



References

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