Difference between revisions of "2010-Slicer-StLouis"
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== Introduction == | == Introduction == | ||
A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization. | A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization. | ||
== Faculty == | == Faculty == | ||
| − | *Wendy Plesniak, Ph.D. | + | *[http://www.spl.harvard.edu/~wjp Wendy Plesniak, Ph.D.] |
| − | * | + | *[http://www.spl.harvard.edu/~noby Nobuhiko Hata, Ph.D.] |
| − | *Ron Kikinis, M.D. | + | *[http://www.spl.harvard.edu/~kikinis Ron Kikinis, M.D.] |
== Tentative Agenda == | == Tentative Agenda == | ||
| − | + | *8:00-9:00 am Computer setup assistance by the instructors | |
*9:00-9:15 am Welcome and presentation of day activities | *9:00-9:15 am Welcome and presentation of day activities | ||
| − | *9:15-9:45 am Introduction to Slicer | + | *9:15-9:45 am [[media:Kikinis-StLouis-2010-06-31.ppt|Introduction to Slicer and the Slicer community]] (Ron Kikinis) |
| − | *9:45-11:00 am Hands-on session 1: Data Loading and 3D Visualization | + | *9:45-10:00 am Break and computer setup |
| + | *10:00-11:00 am Hands-on session 1: Data Loading and 3D Visualization | ||
**[[media:DataLoadingAndVisualization_Slicer3.6_SoniaPujol.pdf | Visualization Tutorial]] | **[[media:DataLoadingAndVisualization_Slicer3.6_SoniaPujol.pdf | Visualization Tutorial]] | ||
**[[media:Slicer3VisualizationDataset.zip | Visualization Data]] | **[[media:Slicer3VisualizationDataset.zip | Visualization Data]] | ||
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*11:15-12:30 pm Hands-on session 2: Interactive Editing | *11:15-12:30 pm Hands-on session 2: Interactive Editing | ||
**[[media:InteractiveEditorTutorial_SoniaPujol.pdf | Interactive Editing Tutorial]] | **[[media:InteractiveEditorTutorial_SoniaPujol.pdf | Interactive Editing Tutorial]] | ||
| − | **[[media: | Interactive Editing Data]] | + | **[[media:EditorTutorialDataset.zip | Interactive Editing Data]] |
*12:30-1:30 pm Lunch | *12:30-1:30 pm Lunch | ||
| − | *1:30- | + | *1:30-2:45 pm Hands-on session 3: Diffusion Tensor Imaging |
**[[media:DiffusionMRITutorial_Slicer3.6_SPujol.pdf | Diffusion MRI Tutorial ]] | **[[media:DiffusionMRITutorial_Slicer3.6_SPujol.pdf | Diffusion MRI Tutorial ]] | ||
**[[media:DiffusionDataset.zip| Diffusion Data]] | **[[media:DiffusionDataset.zip| Diffusion Data]] | ||
| − | + | *3:00-3:15 pm Coffee Break | |
| − | *3: | + | *3:15-4:30 pm Hands-on session 4: Neurosurgical Planning |
| − | *3: | ||
**[http://www.slicer.org/slicerWiki/images/9/9a/SlicerNeurosurgeryTutorial-3.6.ppt Neurosurgery Tutorial] | **[http://www.slicer.org/slicerWiki/images/9/9a/SlicerNeurosurgeryTutorial-3.6.ppt Neurosurgery Tutorial] | ||
**[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Data] | **[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Data] | ||
| − | *4: | + | *4:30-5:00 pm Questions from the audience and concluding remarks |
== Logistics == | == Logistics == | ||
| Line 50: | Line 59: | ||
This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center. | This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center. | ||
| + | == Slicer3 Training Survey == | ||
| + | |||
| + | [http://www.surveymonkey.com/s/GZDXKXQ Click here to take the Slicer3 Training Survey] | ||
Back to [http://www.na-mic.org/Wiki/index.php/Events NA-MIC Events] | Back to [http://www.na-mic.org/Wiki/index.php/Events NA-MIC Events] | ||
Latest revision as of 20:30, 9 August 2011
Home < 2010-Slicer-StLouis | |||
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Contents
Introduction
A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization.
Faculty
Tentative Agenda
- 8:00-9:00 am Computer setup assistance by the instructors
- 9:00-9:15 am Welcome and presentation of day activities
- 9:15-9:45 am Introduction to Slicer and the Slicer community (Ron Kikinis)
- 9:45-10:00 am Break and computer setup
- 10:00-11:00 am Hands-on session 1: Data Loading and 3D Visualization
- 11:00-11:15 am Coffee break
- 11:15-12:30 pm Hands-on session 2: Interactive Editing
- 12:30-1:30 pm Lunch
- 1:30-2:45 pm Hands-on session 3: Diffusion Tensor Imaging
- 3:00-3:15 pm Coffee Break
- 3:15-4:30 pm Hands-on session 4: Neurosurgical Planning
- 4:30-5:00 pm Questions from the audience and concluding remarks
Logistics
- Enrollment is now closed. To be placed on the waitlist, please contact dmarcus@wustl.edu.
- Location of the workshop: Farrell Learning and Teaching Center map, Room 303A&B
- Time: 9am - 5 pm (Lunch will be provided)
Preparations
Desktop workstations will be provided or bring your own laptop with the Slicer3.6 release version appropriate to the platform you'll be using.
- Slicer3.6 Software
- Windows: Slicer3-3.6-2010-06-10-win32.exe
- Mac: Slicer3-3.6-2010-06-10-darwin-x86.tar.gz
- Linux 64: Slicer3-3.6-2010-06-10-linux-x86_64.tar.gz
- Linux 32: Slicer3-3.6-2010-06-10-linux-x86.tar.gz
Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).
- Datasets: We will post the tutorial datasets a few days before the event.
This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center.
Slicer3 Training Survey
Click here to take the Slicer3 Training Survey
Back to NA-MIC Events
