Difference between revisions of "2010-Slicer-UNCDuke"
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__NOTOC__ | __NOTOC__ | ||
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| + | {| class="wikitable2" border="1" cellpadding="8" cellspacing="1" | ||
| + | | colspan="4"|[[Image:Duke-logo.jpg]][[Image:UNC-logo.png]] | ||
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| + | | style="width:25%" |[[Image:NAMIC.jpg]] | ||
| + | | style="width:25%" |[[Image:Logo_nac.gif]] | ||
| + | | style="width:25%" |[[Image:NCIGTlogo.gif]] | ||
| + | | style="width:25%" |[[Image:Catalyst_logo_final.jpg|150px]] | ||
| + | |} | ||
| + | <br> | ||
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{| border="1" cellpadding="8" cellspacing="1" | {| border="1" cellpadding="8" cellspacing="1" | ||
| + | | style="background: #ebeced"| [[Image:TumorArcuate.jpg|400px]] | ||
| style="background: #ebeced" colspan="2" align="center"| <b>Slicer Hands-On Tutorial, August 11, 2010, North Carolina</b> | | style="background: #ebeced" colspan="2" align="center"| <b>Slicer Hands-On Tutorial, August 11, 2010, North Carolina</b> | ||
== Introduction == | == Introduction == | ||
Two half-day Slicer tutorials will be offered at UNC and Duke University on August 11, 2010. The primary objective of these 2 Slicer tutorial events is to introduce users at both universities to the Slicer environment, with a particular focus on its use for visualization, fiber tracking, and editing. | Two half-day Slicer tutorials will be offered at UNC and Duke University on August 11, 2010. The primary objective of these 2 Slicer tutorial events is to introduce users at both universities to the Slicer environment, with a particular focus on its use for visualization, fiber tracking, and editing. | ||
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{| border="1" cellpadding="5" | {| border="1" cellpadding="5" | ||
|- style="background:#ebeced; color:#663300; font-size:120%" align="center" | |- style="background:#ebeced; color:#663300; font-size:120%" align="center" | ||
| − | | style="width:10%" | '''Morning Time''' | + | | style="width:10%" | '''Morning Time''' @ Duke |
| − | | style="width:10%" | '''Afternoon Time''' | + | | style="width:10%" | '''Afternoon Time''' @ UNC |
| style="width:80%" colspan="2"| '''Topic''' | | style="width:80%" colspan="2"| '''Topic''' | ||
|- | |- | ||
| style="background:#efefef; color:#663300"| '''08:15-08:30''' | | style="background:#efefef; color:#663300"| '''08:15-08:30''' | ||
| style="background:#efefef; color:#663300"| '''01:15-01:30''' | | style="background:#efefef; color:#663300"| '''01:15-01:30''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| + | :::Setup | ||
|- | |- | ||
| style="background:#efefef; color:#663300"| '''08:30-09:00''' | | style="background:#efefef; color:#663300"| '''08:30-09:00''' | ||
| style="background:#efefef; color:#663300"| '''01:30-02:00''' | | style="background:#efefef; color:#663300"| '''01:30-02:00''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| − | [[media: | + | :::[[media:Slicer-Overview-NC-2010-08-11.ppt|Slicer and the NA-MIC Kit]] (Ron Kikinis) |
|- | |- | ||
| style="background:#efefef; color:#663300"| '''09:00-09:30''' | | style="background:#efefef; color:#663300"| '''09:00-09:30''' | ||
| style="background:#efefef; color:#663300"| '''02:00-02:30''' | | style="background:#efefef; color:#663300"| '''02:00-02:30''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| − | [[media: | + | :::Basic Visualization ([[media:Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf|PDF]], [[media:Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.ppt|PPT]]) (Ipek Oguz) |
|- | |- | ||
| style="background:#efefef; color:#663300"| '''09:30-10:00''' | | style="background:#efefef; color:#663300"| '''09:30-10:00''' | ||
| style="background:#efefef; color:#663300"| '''02:30-03:00''' | | style="background:#efefef; color:#663300"| '''02:30-03:00''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| − | [[media: | + | :::Slicer interactive editing ([[media:InteractiveEditorTutorial__Slicer3.6_SoniaPujol.pdf|PDF]], [[media:InteractiveEditorTutorial__Slicer3.6_SoniaPujol.ppt|PPT]]) (Steve Pieper) |
|- | |- | ||
| style="background:#efefef; color:#663300"| '''10:00-10:30''' | | style="background:#efefef; color:#663300"| '''10:00-10:30''' | ||
| style="background:#efefef; color:#663300"| '''03:00-03:30''' | | style="background:#efefef; color:#663300"| '''03:00-03:30''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| + | :::Break | ||
|- | |- | ||
| style="background:#efefef; color:#663300"| '''10:30-11:00''' | | style="background:#efefef; color:#663300"| '''10:30-11:00''' | ||
| style="background:#efefef; color:#663300"| '''03:30-04:00''' | | style="background:#efefef; color:#663300"| '''03:30-04:00''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| − | [[media: | + | :::Manual Registration ([[media:ManualRegistration_Slicer3.6.pdf|PDF]], [[media:ManualRegistration_Slicer3.6.ppt|PPT]]) (Julien Finet) |
|- | |- | ||
| style="background:#efefef; color:#663300"| '''11:00-12:00''' | | style="background:#efefef; color:#663300"| '''11:00-12:00''' | ||
| style="background:#efefef; color:#663300"| '''04:00-05:00''' | | style="background:#efefef; color:#663300"| '''04:00-05:00''' | ||
| − | | style="background:#FBF7BB; color:#522200" | + | | style="background:#FBF7BB; color:#522200" align="left"| |
| − | [[media: | + | :::DTI in Slicer ([[media:DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf|PDF]], [[media:DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.ppt|PPT]]) (Martin Styner) |
|} | |} | ||
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== Faculty == | == Faculty == | ||
* [http://www.spl.harvard.edu/~kikinis Ron Kikinis, M.D.] | * [http://www.spl.harvard.edu/~kikinis Ron Kikinis, M.D.] | ||
| + | * [http://www.med.unc.edu/psych/directories/faculty/ipek-oguz-phd Ipek Oguz, Ph.D.] | ||
* [http://www.spl.harvard.edu/~pieper Steve Pieper, Ph.D.] | * [http://www.spl.harvard.edu/~pieper Steve Pieper, Ph.D.] | ||
| + | * [http://www.kitware.com/company/team/finet.html Julien Finet, M.S.] | ||
* [http://www.cs.unc.edu/~styner/ Martin Styner, Ph.D.] | * [http://www.cs.unc.edu/~styner/ Martin Styner, Ph.D.] | ||
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== Logistics == | == Logistics == | ||
* To register for the tutorial @ Duke, please email Allan Johnson: gjohnson at duke.edu | * To register for the tutorial @ Duke, please email Allan Johnson: gjohnson at duke.edu | ||
| − | * Location @ Duke: | + | * Location @ Duke: 1st floor, Room D-106, Levine Science Research Center (LSRC) |
* To register for the tutorial @ UNC, please email Ipek Oguz: ipek at cs.unc.edu | * To register for the tutorial @ UNC, please email Ipek Oguz: ipek at cs.unc.edu | ||
* Location @ UNC: Brooks Building, Rm 141 (Faculty Conference Room) | * Location @ UNC: Brooks Building, Rm 141 (Faculty Conference Room) | ||
| + | ** Map: Go to [http://www.unc.edu/maps/ UNC maps] and search for Brooks Building | ||
== Preparations == | == Preparations == | ||
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Please complete the following items prior to the workshop. | Please complete the following items prior to the workshop. | ||
| − | Software: Please bring your own laptop with the Slicer3.6 version appropriate to the computer you will be bringing to the workshop. | + | '''Software''': Please bring your own laptop with the Slicer3.6 version appropriate to the computer you will be bringing to the workshop. |
The version of Slicer to download will be posted a few days before the event. | The version of Slicer to download will be posted a few days before the event. | ||
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*Linux 64: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86_64.tar.gz | *Linux 64: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86_64.tar.gz | ||
| − | Data: Please install the [[media:Slicer3VisualizationDataset.zip | 3D Visualization dataset]], the [[media:EditorTutorialDataset.zip | Interactive Editor dataset]], [[media:DiffusionDataset.zip| Diffusion dataset]], and the [ | + | '''Data''': Please install the [[media:Slicer3VisualizationDataset.zip | 3D Visualization dataset]], the [[media:EditorTutorialDataset.zip | Interactive Editor dataset]], [[media:DiffusionDataset.zip| Diffusion dataset]], and the [https://www.slicer.org/wiki/File:Slicer3_Tutorial_ManualRegistration_ExampleDataset.zip Manual Registration dataset]. |
| − | Tutorials: Please download the | + | '''Tutorials''': Please download the tutorials in the table above, in PDF or PPT format. |
| − | Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred). | + | '''Hardware''' minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).<br> |
'''Recommended hardware: 4-8GB of main memory and 512MB or more of dedicated graphics memory with a nvidia gpu.''' | '''Recommended hardware: 4-8GB of main memory and 512MB or more of dedicated graphics memory with a nvidia gpu.''' | ||
Latest revision as of 17:09, 10 July 2017
Home < 2010-Slicer-UNCDuke
 
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Slicer Hands-On Tutorial, August 11, 2010, North Carolina
IntroductionTwo half-day Slicer tutorials will be offered at UNC and Duke University on August 11, 2010. The primary objective of these 2 Slicer tutorial events is to introduce users at both universities to the Slicer environment, with a particular focus on its use for visualization, fiber tracking, and editing. | |
Schedule
| Morning Time @ Duke | Afternoon Time @ UNC | Topic | |
| 08:15-08:30 | 01:15-01:30 |
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| 08:30-09:00 | 01:30-02:00 |
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| 09:00-09:30 | 02:00-02:30 | ||
| 09:30-10:00 | 02:30-03:00 | ||
| 10:00-10:30 | 03:00-03:30 |
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| 10:30-11:00 | 03:30-04:00 | ||
| 11:00-12:00 | 04:00-05:00 | ||
Faculty
Logistics
- To register for the tutorial @ Duke, please email Allan Johnson: gjohnson at duke.edu
- Location @ Duke: 1st floor, Room D-106, Levine Science Research Center (LSRC)
- To register for the tutorial @ UNC, please email Ipek Oguz: ipek at cs.unc.edu
- Location @ UNC: Brooks Building, Rm 141 (Faculty Conference Room)
- Map: Go to UNC maps and search for Brooks Building
Preparations
Please complete the following items prior to the workshop.
Software: Please bring your own laptop with the Slicer3.6 version appropriate to the computer you will be bringing to the workshop. The version of Slicer to download will be posted a few days before the event.
- Windows XP/7: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-win32.exe
- Mac OSX Darwin Intel: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-darwin-x86.tar.gz
- Linux 32: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86.tar.gz
- Linux 64: http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-05-linux-x86_64.tar.gz
Data: Please install the 3D Visualization dataset, the Interactive Editor dataset, Diffusion dataset, and the Manual Registration dataset.
Tutorials: Please download the tutorials in the table above, in PDF or PPT format.
Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).
Recommended hardware: 4-8GB of main memory and 512MB or more of dedicated graphics memory with a nvidia gpu.
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