Difference between revisions of "Events:Dundee-Dec-2010"
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== Logistics == | == Logistics == | ||
| + | <big><big>This is a hands-on tutorial. You need a good laptop and you need to pre-install data and software. See below for more information.</big></big> | ||
*Date: Monday December 6, 2010 | *Date: Monday December 6, 2010 | ||
| − | *Location: Dundee, | + | *Location: Room, TBA, [http://www.imsat.org Institute for Medical Sciences and Technology], University of Dundee, Wislon House, 1 Wurzburg Loan, Dundee MediPark, Dundee DD2 1FD |
== Agenda == | == Agenda == | ||
* 9-9.30 Setup for those who had trouble with the installation | * 9-9.30 Setup for those who had trouble with the installation | ||
| − | * 9.30-10.30 [ | + | * 9.30-10.30 [https://na-mic.org/w/images/d/d4/Combined-RSNA2010-CTSA.ppt Combined tutorial slides (ppt) ]: |
**Slicer3 Minute tutorial | **Slicer3 Minute tutorial | ||
**Quantitative Measurement of Volumetric Change: ChangeTracker Tutorial | **Quantitative Measurement of Volumetric Change: ChangeTracker Tutorial | ||
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*10.45-12.00 Interactive editor, DTI visualization | *10.45-12.00 Interactive editor, DTI visualization | ||
**Please download the [[media:Case-040-NeurofMRI-WithTransforms.zip| NeurofMRI Case 40]] in preparation for the workshop. | **Please download the [[media:Case-040-NeurofMRI-WithTransforms.zip| NeurofMRI Case 40]] in preparation for the workshop. | ||
| − | 12.00-13.00 Lunch | + | *12.00-13.00 Lunch |
*13.00 IGT | *13.00 IGT | ||
| − | **Demo of the OpenIGTLink simulator | + | **Demo of the OpenIGTLink simulator. |
**How to connect your tracker to Slicer | **How to connect your tracker to Slicer | ||
| + | **[http://www.slicer.org/slicerWiki/images/b/bc/OpenIGTLinkTutorial_Slicer3.6.2_JunichiTokuda_Dec2010.ppt OpenIGTLink Tutorial slides (ppt)]. | ||
| + | **[http://wiki.slicer.org/slicerWiki/index.php/Modules:OpenIGTLinkIF-3.6-Simulators Link to the OpenIGTLink Data simulator]. | ||
== Teaching Faculty== | == Teaching Faculty== | ||
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All participants are required to come with their own laptop computer and install the software and datasets prior to the event.</span>. A minimum of 2 GB of RAM (4 GB if possible) and a dedicated graphic accelerator with 256MB of on-board graphic memory (512MB is better) are required. | All participants are required to come with their own laptop computer and install the software and datasets prior to the event.</span>. A minimum of 2 GB of RAM (4 GB if possible) and a dedicated graphic accelerator with 256MB of on-board graphic memory (512MB is better) are required. | ||
| − | Please install the '''Slicer3.6.2''' | + | Please install the '''Slicer3.6.2-2010-12-03 Nightly build version''' appropriate to the laptop computer you'll be bringing to the tutorial: |
| − | + | * [http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows''' (Slicer3-3.6.2-2010-12-03-win32.exe)] | |
| − | * [http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows''' (Slicer3-3.6.2-2010-12-03-win32.exe) | + | * [[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz)]] |
| − | * [[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux- | + | * [[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86.tar.gz | '''Linux 32''' (Slicer3-3.6.2-2010-12-03-linux-x86.tar.gz)]] |
* [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]] | * [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]] | ||
Latest revision as of 18:27, 10 July 2017
Home < Events:Dundee-Dec-2010 | ||||
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Contents
Logistics
This is a hands-on tutorial. You need a good laptop and you need to pre-install data and software. See below for more information.
- Date: Monday December 6, 2010
- Location: Room, TBA, Institute for Medical Sciences and Technology, University of Dundee, Wislon House, 1 Wurzburg Loan, Dundee MediPark, Dundee DD2 1FD
Agenda
- 9-9.30 Setup for those who had trouble with the installation
- 9.30-10.30 Combined tutorial slides (ppt) :
- Slicer3 Minute tutorial
- Quantitative Measurement of Volumetric Change: ChangeTracker Tutorial
- Quantitative Measurements for Functional Imaging: PETCTFusion Tutorial
- Please download the RSNA 2010 CTSA tutorial data in preparation for the workshop.
- 10.30-10.45 Break
- 10.45-12.00 Interactive editor, DTI visualization
- Please download the NeurofMRI Case 40 in preparation for the workshop.
- 12.00-13.00 Lunch
- 13.00 IGT
- Demo of the OpenIGTLink simulator.
- How to connect your tracker to Slicer
- OpenIGTLink Tutorial slides (ppt).
- Link to the OpenIGTLink Data simulator.
Teaching Faculty
- Ron Kikinis, M.D., Surgical Planning Laboratory, Brigham and Women's Hospital, Harvard Medical School
Registration
To sign-up for this event, please fill in the registration form send it by e-mail to Sonia Pujol, PhD [spujol at bwh.harvard.edu].
Preparation for the Workshop
The workshop combines oral presentations and instructor-led hands-on sessions with the participants working on their own laptop computers. All participants are required to come with their own laptop computer and install the software and datasets prior to the event.. A minimum of 2 GB of RAM (4 GB if possible) and a dedicated graphic accelerator with 256MB of on-board graphic memory (512MB is better) are required.
Please install the Slicer3.6.2-2010-12-03 Nightly build version appropriate to the laptop computer you'll be bringing to the tutorial:
- Windows (Slicer3-3.6.2-2010-12-03-win32.exe)
- Linux 64 (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz)
- Linux 32 (Slicer3-3.6.2-2010-12-03-linux-x86.tar.gz)
- Mac Darwin (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)
Please download the RSNA 2010 CTSA tutorial data in preparation for the workshop.
Slicer3 Training Survey
Please click here to take the Slicer3 Training Survey
Slicer Community
Participants are invited to join the Slicer user and Slicer developer community for questions and feature requests related to the software.
Back to Events 2010
