Difference between revisions of "Journal of Slicer Workshop Tests"

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== '''Concept''' ==
 
== '''Concept''' ==
  
−
This page will be used as a journal of tests for the Slicer3 workshops on four different platforms (Linux 32 and 64 bit, Mac Darwin, and Windows).
+
This page will be used as a journal of tests for the Slicer workshops on four different platforms (Linux 32 and 64 bit, Mac Darwin, and Windows).
  
−
*[http://www.na-mic.org/Wiki/index.php/Events:_Johns_Hopkins_University_Seminar_April_2011#Introduction JHU workshop April5, 2011]
+
* Event: [[http://www.na-mic.org/Wiki/index.php/RSNA_2011 RSNA 2011 ]]
 +
 
 +
{| class="wikitable sortable labelpage labelpagetable" border="1"
 +
|-
 +
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 +
|-
 +
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| Slicer4.0gamma2011-11-21 || Mac OSX Lion ||11/22/2011 || slide 39: when downloading the label layer, the foreground 
 +
disappeared, it needs to be reselected. slide 76: when using the compare viewer, I only have the option to 
 +
compare 2 views so I end up with 4 windows on the screen instead of 3. Every time I tried to go from lightbox 
 +
viewer to conventional viewer (last slide of the part 4), Slicer crashed. When I tried without data loaded to switch between the two I 
 +
have no problem, it seems linked to the dataset. Closing the scene at the end of part4 or part 5 of the tutorial causes Slicer to crash. (Valerie Humblet)
 +
|-
 +
|[[Media:RSNA2010_OsirixPanoramixDataset.zip | Abdominal CT scan with AAA (Osirix Panoramix Dataset)]]||Slicer4.0gamma2011-11-21||Mac OSX Lion||11/22/2011||cropping, volume rendering and GPU: OK, did not test annotations. No problem when closing the scene (Valerie Humblet)
 +
|-
 +
|[https://na-mic.org/w/images/7/79/RSNA2010_Prostate.zip Prostate data]||Slicer4.0gamma2011-11-21||Mac OSX Lion||11/22/2011||
 +
|-
 +
|[https://na-mic.org/w/images/2/28/RSNA2011_Prostate.zip Prostate data RSNA 2011 in progress]||Slicer4.0gamma2011-11-21||Mac OSX Lion||11/22/2011||Unable to unzip the file. It shows as .zip.download (Valerie Humblet)
 +
|-
 +
|[https://na-mic.org/w/images/3/33/Slicer_data-RSNA2010-CTSA.zip Quantitative imaging]||Slicer4.0gamma2011-11-23||Mac OsX Lion||11/23/2011||Slicer3 minutes: OK; PET/CT (using volumes and SUV computation): OK; Change tracker: Need to use the volume rendering module to view VOI widget in 3D viewer, does not appear automatically, close scene causes Slicer to crash (Valerie Humblet)
 +
|-
 +
|[https://na-mic.org/w/images/3/33/Slicer_data-RSNA2010-CTSA.zip Quantitative imaging]||Slicer4.0gamma2011-11-23||Windows 2008 32 bits Vista||11/23/2011||Slicer3 minutes: OK; PET/CT (using volumes and SUV computation): OK; Change tracker: Need to use the volume rendering module to view VOI widget in 3D viewer, does not appear automatically, close scene causes Slicer to crash (Valerie Humblet)
 +
|}
 +
 
 +
*'''Event''': [http://www.na-mic.org/Wiki/index.php/Events:2011-06-15-Robarts-Slicer-Workshop Robarts Institute workshop, Ontario, Canada]
 +
* Datasets:
 +
** [[media:Slicer3VisualizationDataset.zip | 3D Visualization dataset]]
 +
** [[media:WhiteMatterExplorationData.zip‎| White Matter Exploration dataset]]
 +
** [[media:HelloPython.zip | HelloPython dataset]]
 +
** [[media:Slicer3_BRAINSFITRegistration.zip | BRAINSFIT Registration dataset]]
 +
 
 +
{| class="wikitable sortable labelpage labelpagetable" border="1"
 +
|-
 +
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 +
|-
 +
|[[media:Slicer3_DataLoadingAndVisualization_JHU2011_SoniaPujol.pdf |Data Loading and 3D Visualization]]|| [http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz] || Linux 32 || 06-08-2011 || OK on Ubuntu 10.10 32-bit (Junichi Tokuda)
 +
|-
 +
|[[media:Slicer3_DataLoadingAndVisualization_JHU2011_SoniaPujol.pdf |Data Loading and 3D Visualization]]||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz]|| Linux 64  || 06-08-2011 || OK on Fedora 14 64-bit (Atsushi)
 +
|-
 +
|[[media:Slicer3_DataLoadingAndVisualization_JHU2011_SoniaPujol.pdf |Data Loading and 3D Visualization]]||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz]|| Mac Darwin  || || OK (Sonia Pujol)
 +
|-
 +
|[[media:Slicer3_DataLoadingAndVisualization_JHU2011_SoniaPujol.pdf |Data Loading and 3D Visualization]]||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe]|| Windows XP  || 06-09-2011 ||  OK (Junichi Tokuda)
 +
|-
 +
|[[media:Slicer3_DataLoadingAndVisualization_JHU2011_SoniaPujol.pdf |Data Loading and 3D Visualization]]||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe]|| Windows 7  || 06-07-2011 || Laurent Chauvin
 +
Slow on Windows 7 (64 bits).
 +
First two times, Slicer crashed (first time when window opened after clicking Add Volume, second time when I tried to switch to Data module)
 +
|-
 +
|[[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ | Exploring peritumoral white matter fibers for neurosurgical planning ]]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz]|| Linux 32|| 06-08-2011 || OK on Ubuntu 10.10 (32-bit) (Junichi)
 +
|-
 +
|[[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ | Exploring peritumoral white matter fibers for neurosurgical planning ]]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz]|| Linux 64  || 06-08-2011 || Atsushi
 +
DTI volume was displayed with strange colors, or Slicer was crushed when I set Select the Scalar Mode to "Color By Orientation" on Fedora 14 64bit.
 +
|-
 +
|[[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ | Exploring peritumoral white matter fibers for neurosurgical planning ]]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz]|| Mac Darwin  || 06-09-2011  || OK (Sonia Pujol)
 +
|-
 +
|[[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ | Exploring peritumoral white matter fibers for neurosurgical planning ]]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe]|| Windows XP  || 06-08-2011 || OK (Junichi Tokuda)
 +
|-
 +
|[[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ | Exploring peritumoral white matter fibers for neurosurgical planning ]]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe]|| Windows 7  || 06-07-2011 || Laurent Chauvin
 +
Too slow to draw a line in grow cut mode (just points, but it's working.
 +
One crash: Uncaught exception: bad allocation.
 +
|-
 +
|[https://na-mic.org/w/images/3/3c/ProgrammingIntoSlicer3.6.1_HelloPython_MICCAI2010_SoniaPujol.pdf HelloPython]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz] || Linux 32 || 06-08-2011 || OK on Ubuntu 10.10 (32-bit)(Junichi)
 +
|-
 +
|[https://na-mic.org/w/images/3/3c/ProgrammingIntoSlicer3.6.1_HelloPython_MICCAI2010_SoniaPujol.pdf HelloPython ]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz]|| Linux 64 || 06-09-2011 || Atsushi
 +
When adding "inputVolume = scene.GetNodeByID(HelloPythonInputVolume)" to the source code, "Python HelloPython" was disappeared from the module list. So, I was not able to execute this module on Fedora 14 64bit. The binary version are Slicer3-3.6.3-2011-06-07-linux-x86_64 and Slicer3-3.6.3-2011-03-04-linux-x86_64. 
 +
|-
 +
|[https://na-mic.org/w/images/3/3c/ProgrammingIntoSlicer3.6.1_HelloPython_MICCAI2010_SoniaPujol.pdf HelloPython ]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz]|| Mac Darwin  ||  06-09-2011 || OK (Sonia Pujol)
 +
|-
 +
|[https://na-mic.org/w/images/3/3c/ProgrammingIntoSlicer3.6.1_HelloPython_MICCAI2010_SoniaPujol.pdf HelloPython ]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows XP || 06-09-2011 || OK (Junichi Tokuda)
 +
|-
 +
|[https://na-mic.org/w/images/3/3c/ProgrammingIntoSlicer3.6.1_HelloPython_MICCAI2010_SoniaPujol.pdf HelloPython ]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows 7 || 06-08-2011 || Laurent Chauvin
 +
Becareful when modifying HelloPython.py , Python is tab sensitive.
 +
|-
 +
|[https://na-mic.org/w/images/5/5a/OpenIGTLinkIFTutorial_Slicer3.6.3_JunichiTokuda_June2011.pdf OpenIGTLink]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz] || Linux 32 || 06-07-2011 || OK on Ubuntu 10.10 (32-bit) (Junichi Tokuda)
 +
|-
 +
|[https://na-mic.org/w/images/5/5a/OpenIGTLinkIFTutorial_Slicer3.6.3_JunichiTokuda_June2011.pdf OpenIGTLink]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz]|| Linux 64 || 06-09-2011 || OK on Fedora 14 (64-bit) (Atsushi)
 +
|-
 +
|[https://na-mic.org/w/images/5/5a/OpenIGTLinkIFTutorial_Slicer3.6.3_JunichiTokuda_June2011.pdf OpenIGTLink]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz]|| Mac Darwin  || || OK( Sonia Pujol)
 +
|-
 +
|[https://na-mic.org/w/images/5/5a/OpenIGTLinkIFTutorial_Slicer3.6.3_JunichiTokuda_June2011.pdf OpenIGTLink]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows XP || 06-09-2011 || OK (Junichi Tokuda)
 +
|-
 +
|[https://na-mic.org/w/images/5/5a/OpenIGTLinkIFTutorial_Slicer3.6.3_JunichiTokuda_June2011.pdf OpenIGTLink]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows 7 || 06-07-2011 || Laurent Chauvin
 +
|-
 +
|[https://na-mic.org/w/images/f/f2/Slicer3_BRAINSFITRegistration_DPace_June2011.pdf BRAINSFIT Registration]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz] || Linux 32 || 06-09-2011 || OK (Junichi Tokuda)
 +
|-
 +
|[https://na-mic.org/w/images/f/f2/Slicer3_BRAINSFITRegistration_DPace_June2011.pdf BRAINSFIT Registration]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz]|| Linux 64 || 06-10-2011 || OK (Danielle Pace)
 +
|-
 +
|[https://na-mic.org/w/images/f/f2/Slicer3_BRAINSFITRegistration_DPace_June2011.pdf BRAINSFIT Registration]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz]|| Mac Darwin  || || -when loading the scene, Slicer displays a warning that the users should ignore
 +
-for visualizing the glyphs, you need to tell the participants to put DTI_iso in Bg viewer
 +
- when select 'glyphs on display' with Scalar Mode 'Color by orientation', the glyphs are correctly displayed in the 3D viewer but all the 2D views are wrong
 +
-registration and resampling test work on MacBook Pro (8GB RAM) (Sonia Pujol)
 +
NOTE: Glyphs removed from tutorial (Danielle Pace)
 +
|-
 +
|[https://na-mic.org/w/images/f/f2/Slicer3_BRAINSFITRegistration_DPace_June2011.pdf BRAINSFIT Registration]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows XP || 06-09-2011 || Error on final "Resample DTI Volume" step - Filed to allocat memory for image. (Junichi Tokuda)
 +
|-
 +
|[https://na-mic.org/w/images/f/f2/Slicer3_BRAINSFITRegistration_DPace_June2011.pdf BRAINSFIT Registration]
 +
||[http://boggs.bwh.harvard.edu/slicer/Robarts-2011/Slicer3-3.6.3-2011-06-07-win32.exe Slicer3-3.6.3-2011-06-07-win32.exe] || Windows 7 || 06-09-2011 || Danielle Error on final "Resample DTI Volume" step - memory error, unable to allocate 77856768 elements of size 4 bytes
 +
Laurent Chauvin: Unable to complete last step. Message: Completed with errors, but no more informations about error.
 +
|}
 +
 
 +
*[http://www.na-mic.org/Wiki/index.php/Events:_Johns_Hopkins_University_Seminar_April_2011#Introduction JHU workshop April 5, 2011]
 
*[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
 
*[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
 
*[http://www.slicer.org/slicerWiki/images/c/cf/DiffusionDataset.zip Diffusion Data]
 
*[http://www.slicer.org/slicerWiki/images/c/cf/DiffusionDataset.zip Diffusion Data]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
+
|-
 +
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 +
|-
 +
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]|| [http://na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz] || Linux 32||04/4/11 || OK (Hayes)
 +
|-
 +
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]||[http://na-mic.org/Slicer/Download/Release/linux-x86_64/Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz]|| Linux 64  || 04/1/11|| OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]||[http://na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz]|| Mac Darwin  || 04/1/11||OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]||[http://na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.3-2011-03-04-win32.exe Slicer3-3.6.3-2011-03-04-win32.exe]|| Windows XP&7  || 04/4/11  || OK (Hayes)
 +
|-
 +
|[https://na-mic.org/w/images/3/37/WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf Exploring peritumoral white matter fibers for neurosurgical planning ]
 +
||[http://na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz]|| Linux 32|| 04/04/11|| OK (Hayes)
 +
|-
 +
|[https://na-mic.org/w/images/3/37/WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf Exploring peritumoral white matter fibers for neurosurgical planning ]
 +
||[http://na-mic.org/Slicer/Download/Release/linux-x86_64/Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz]|| Linux 64  || 04/1/11  || OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/3/37/WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf Exploring peritumoral white matter fibers for neurosurgical planning ]
 +
||[http://na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz]|| Mac Darwin  || 04/1/11|| OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/3/37/WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf Exploring peritumoral white matter fibers for neurosurgical planning ]
 +
||[http://na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.3-2011-03-04-win32.exe Slicer3-3.6.3-2011-03-04-win32.exe]|| Windows XP&7  || 04/04/11 || OK (Hayes)
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] ||  [http://na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz] || Linux 32 || 04/04/11|| OK (Hayes)
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://na-mic.org/Slicer/Download/Release/linux-x86_64/Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz]|| Linux 64 || 04/1/11||OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz]|| Mac Darwin  || 04/1/11||OK (SPujol)
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.3-2011-03-04-win32.exe Slicer3-3.6.3-2011-03-04-win32.exe] || Windows XP&7 || 04/04/11|| OK (Hayes)
 +
|}
 +
 
 +
{| class="wikitable sortable labelpage labelpagetable" border="1"
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32|| ||
+
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32|| 03/04/11 || Crashes when VTK models are rotated in 3D viewer (Hayes) (anago.nmr) [http://na-mic.org/Bug/view.php?id=1111 Bug Report]
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || 02/28/11 || OK, slides need updating (Hayes)
+
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || 03/04/11 || OK (Hayes) (panamint.nmr)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || 03/02/11 || Crashes when VTK models are rotated in 3D viewer (Hayes) [http://na-mic.org/Bug/view.php?id=1111 Bug Report]
+
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || 03/04/11 || Crashes when VTK models are rotated in 3D viewer (Hayes) (hima.nmr) [http://na-mic.org/Bug/view.php?id=1111 Bug Report]
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  || ||
+
|[https://na-mic.org/w/images/2/2e/Slicer3_DataLoadingAndVisualization_UCSF2010_SoniaPujol.pdf Data Loading and 3D Visualization - UCSF Version]||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  || N/A || Testing Slicer3-3.6.3-2011-03-04 instead
 
|-
 
|-
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
−
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ]|| Linux 32|| || Waiting on completed slides (Hayes)
+
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ]|| Linux 32|| N/A|| Waiting on completed slides (Hayes)
 
|-
 
|-
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
−
|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || || Waiting on completed slides (Hayes)
+
|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || N/A || Waiting on completed slides (Hayes)
 
|-
 
|-
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
−
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || || Waiting on completed slides (Hayes)
+
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || N/A|| Waiting on completed slides (Hayes)
 
|-
 
|-
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
 
|Exploring peritumoral white matter fibers for neurosurgical planning  
−
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  || || Waiting on completed slides (Hayes)
+
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  ||N/A || Waiting on completed slides (Hayes)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32 || ||
+
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32 || N/A || Testing Slicer3-3.6.3-2011-03-04 instead
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64 || N/A ||Testing Slicer3-3.6.3-2011-03-04 instead
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  ||N/A ||Testing Slicer3-3.6.3-2011-03-04 instead
 +
|-
 +
|[https://na-mic.org/w/images/3/35/DiffusionMRITutorial_UCSF2010_SoniaPujol.pdf Diffusion Tensor Imaging - UCSF Version] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7 || N/A|| Testing Slicer3-3.6.3-2011-03-04 instead
 +
|}
 +
 
 +
{| class="wikitable sortable labelpage labelpagetable" border="1"
 +
|-
 +
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 +
|-
 +
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32|| 03/03/11 || OK (Hayes) (anago.nmr)
 +
|-
 +
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || 02/28/11 || OK, slides need updating (Hayes) (panamint.nmr)
 +
|-
 +
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || 03/02/11 || Crashes when VTK models are rotated in 3D viewer (Hayes) (hima.nmr) [http://na-mic.org/Bug/view.php?id=1111 Bug Report]
 +
|-
 +
|[http://www.slicer.org/slicerWiki/images/3/3b/Slicer3_DataLoadingAndVisualization_SoniaPujol3.6.pdf Data Loading and 3D Visualization]||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  || N/A || Testing UCSF slides instead
 +
|-
 +
|Exploring peritumoral white matter fibers for neurosurgical planning
 +
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ]|| Linux 32||N/A || Waiting on completed slides (Hayes)
 +
|-
 +
|Exploring peritumoral white matter fibers for neurosurgical planning
 +
|| [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64  || N/A || Waiting on completed slides (Hayes)
 +
|-
 +
|Exploring peritumoral white matter fibers for neurosurgical planning
 +
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || N/A|| Waiting on completed slides (Hayes)
 +
|-
 +
|Exploring peritumoral white matter fibers for neurosurgical planning
 +
||[http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7  || N/A|| Waiting on completed slides (Hayes)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64 || 02/28/11 || OK pending minor slide edits (Hayes)
+
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 32 || 03/03/11 || OK (Hayes) (anago.nmr)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || ||  
+
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Linux 64 || 02/28/11 || OK pending minor slide edits (Hayes) (panamint.nmr)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7 || ||  
+
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Mac Darwin  || 03/03/11 || OK (Hayes) (hima.nmr)
 
|-
 
|-
 +
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC2/ 3.6.3-RC2 ] || Windows XP&7 || N/A || Testing UCSF slides instead
 
|}
 
|}
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 74: Line 254:
 
|-
 
|-
 
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC1/ 3.6.3-RC1 ] || Windows XP&7 || N/A || Testing 3.6.3 RC2 instead (Hayes)
 
|[http://www.slicer.org/slicerWiki/images/f/fc/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Aug2010.pdf Diffusion Tensor Imaging] || [http://boggs.bwh.harvard.edu/slicer/3.6.3-RC1/ 3.6.3-RC1 ] || Windows XP&7 || N/A || Testing 3.6.3 RC2 instead (Hayes)
−
|
 
−
|-
 
 
|}
 
|}
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt  CTSA Tutorial Slides]  || [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz‎  | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]]
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt  CTSA Tutorial Slides]  || [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz‎  | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]]
 
  ||Mac ||12-03-2010 || OK (tested by SPujol)
 
  ||Mac ||12-03-2010 || OK (tested by SPujol)
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt CTSA Tutorial Slides] ||[[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz‎ | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64)]]
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt CTSA Tutorial Slides] ||[[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz‎ | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64)]]
 
||Linux 64|| 12-03-2010 || OK (tested by SPujol)
 
||Linux 64|| 12-03-2010 || OK (tested by SPujol)
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt CTSA Tutorial Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt CTSA Tutorial Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
 
|Windows XP & Windows 7|| 12-03-2010 || OK (tested by SPujol)
 
|Windows XP & Windows 7|| 12-03-2010 || OK (tested by SPujol)
 
|-
 
|-
Line 101: Line 278:
 
|Linux 64|| 12-04-2010 || OK (Tested by Junichi)
 
|Linux 64|| 12-04-2010 || OK (Tested by Junichi)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/index.php/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf  Interactive Editor Slides]  || [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz‎  | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]]
+
|[https://www.slicer.org/wiki/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf  Interactive Editor Slides]  || [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz‎  | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]]
  
 
  ||Mac || 12-05-2010 || OK (Tested by Junichi)
 
  ||Mac || 12-05-2010 || OK (Tested by Junichi)
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/index.php/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf  Interactive Editor Slides] ||[[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz‎ | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64)]]
+
|[https://www.slicer.org/wiki/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf  Interactive Editor Slides] ||[[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz‎ | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64)]]
 
||Linux 64|| 12-04-2010 || OK (tested by SPujol)
 
||Linux 64|| 12-04-2010 || OK (tested by SPujol)
  
 
|-
 
|-
−
|[http://www.slicer.org/slicerWiki/index.php/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf Interactive Editor  Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
+
|[https://www.slicer.org/wiki/File:InteractiveEditorTutorial_Slicer3.6-SoniaPujol.pdf Interactive Editor  Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
 
|Windows XP & Windows 7|| 12-04-2010 || OK (tested by SPujol)
 
|Windows XP & Windows 7|| 12-04-2010 || OK (tested by SPujol)
  
Line 123: Line 300:
 
|[http://www.slicer.org/slicerWiki/images/c/c7/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Dec2010.pdf Diffusion Tensor Imaging Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
 
|[http://www.slicer.org/slicerWiki/images/c/c7/DiffusionMRITutorial_Slicer3.6.1_SoniaPujol_Dec2010.pdf Diffusion Tensor Imaging Slides] ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows ''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
 
|Windows XP & Windows 7|| 12-04-2010 || OK (tested by SPujol)
 
|Windows XP & Windows 7|| 12-04-2010 || OK (tested by SPujol)
−
 
−
|-
 
−
 
 
|}
 
|}
  
Line 131: Line 305:
  
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' NAMIC Workshop November 29, 2010 ]
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' NAMIC Workshop November 29, 2010 ]
−
<table>
+
 
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 143: Line 317:
 
|-
 
|-
 
|[http://www.na-mic.org/Wiki/index.php/File:3DVisualization_SoniaPujol_RSNA2010.ppt] | 3D Interactive Visualization of DICOM Images for Radiology Applications|| http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-win32.exe|| Win XP&7|| 11-2-2010|| All OK
 
|[http://www.na-mic.org/Wiki/index.php/File:3DVisualization_SoniaPujol_RSNA2010.ppt] | 3D Interactive Visualization of DICOM Images for Radiology Applications|| http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-win32.exe|| Win XP&7|| 11-2-2010|| All OK
−
|-
 
 
|}
 
|}
−
<references/>
 
  
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' Quantitative Medical Imaging for Clinical Research and Practice  November 30, 2010 ]
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' Quantitative Medical Imaging for Clinical Research and Practice  November 30, 2010 ]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides]  ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz ||Mac ||11-2-2010 || All OK
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides]  ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz ||Mac ||11-2-2010 || All OK
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides] || http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz||Linux 32||11-2-2010|| All OK
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides] || http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz||Linux 32||11-2-2010|| All OK
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides] ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz||Linux 64|| 11-2-2010|| All OK
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA09-WJP.ppt draft target tutorial slides] ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz||Linux 64|| 11-2-2010|| All OK
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt  Target tutorial slides]  ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz ||Mac ||- || -
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt  Target tutorial slides]  ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz ||Mac ||- || -
 
|-
 
|-
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt Target tutorial slides] || http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz||Linux 32||- || -
+
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt Target tutorial slides] || http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz||Linux 32||- || -
−
|-
 
−
|[http://www.na-mic.org/Wiki/images/4/4e/Combined-RSNA2010-CTSA.ppt Target tutorial slides] ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz||Linux 64||- || -
 
 
|-
 
|-
 +
|[https://na-mic.org/w/images/4/4e/Combined-RSNA2010-CTSA.ppt Target tutorial slides] ||http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz||Linux 64||- || -
 
|}
 
|}
−
<references/>
+
 
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' Quantitative Imaging Reading Room  November 27-December 3, 2010 ]
 
* [http://www.na-mic.org/Wiki/index.php/RSNA2010.PlanningLog '''RSNA 2010''' Quantitative Imaging Reading Room  November 27-December 3, 2010 ]
−
<table>
+
 
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 176: Line 346:
 
| [http://www.na-mic.org/Wiki/index.php/File:RSNA2010QIRR-LoopSlides.ppt QIRR Presentation] (presentation only, no tutorial)  ||-- ||-- ||-- ||--  
 
| [http://www.na-mic.org/Wiki/index.php/File:RSNA2010QIRR-LoopSlides.ppt QIRR Presentation] (presentation only, no tutorial)  ||-- ||-- ||-- ||--  
 
|}
 
|}
−
<references/>
+
 
 +
 
  
 
* [http://www.na-mic.org/Wiki/index.php/Events:UCLA-Slicer-Training-11-2010 - UCLA Workshop, Los Angeles, CA]
 
* [http://www.na-mic.org/Wiki/index.php/Events:UCLA-Slicer-Training-11-2010 - UCLA Workshop, Los Angeles, CA]
 
**[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
 
**[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
−
**[http://www.slicer.org/slicerWiki/index.php/File:EditorTutorialDataset.zip Interactive Editor Data]
+
**[https://www.slicer.org/wiki/File:EditorTutorialDataset.zip Interactive Editor Data]
 
**[http://www.slicer.org/slicerWiki/images/8/88/Slicer3_Tutorial_ManualRegistration_ExampleDataset.zip Manual Registration Data]
 
**[http://www.slicer.org/slicerWiki/images/8/88/Slicer3_Tutorial_ManualRegistration_ExampleDataset.zip Manual Registration Data]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 212: Line 382:
 
|[http://www.slicer.org/slicerWiki/images/0/0a/ManualRegistration_Slicer3.6.pdf Manual Registration]||[http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23] || Windows XP&7  ||08-25-2010 ||All OK
 
|[http://www.slicer.org/slicerWiki/images/0/0a/ManualRegistration_Slicer3.6.pdf Manual Registration]||[http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23] || Windows XP&7  ||08-25-2010 ||All OK
 
|}
 
|}
−
<references/>
 
−
 
  
 
* [http://www.na-mic.org/Wiki/index.php/Events:UCSF-Slicer-Training-11-2010 - UCSF Workshop, San Francisco, CA]
 
* [http://www.na-mic.org/Wiki/index.php/Events:UCSF-Slicer-Training-11-2010 - UCSF Workshop, San Francisco, CA]
 
**[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
 
**[http://www.slicer.org/slicerWiki/images/6/61/Slicer3VisualizationDataset.zip Data Loading and 3D Visualization Data]
−
**[http://www.slicer.org/slicerWiki/index.php/File:EditorTutorialDataset.zip Interactive Editor Data]
+
**[https://www.slicer.org/wiki/File:EditorTutorialDataset.zip Interactive Editor Data]
 
**[http://www.slicer.org/slicerWiki/images/8/88/Slicer3_Tutorial_ManualRegistration_ExampleDataset.zip Manual Registration Data]
 
**[http://www.slicer.org/slicerWiki/images/8/88/Slicer3_Tutorial_ManualRegistration_ExampleDataset.zip Manual Registration Data]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 243: Line 410:
 
|ABC module ?||[http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23] || Windows XP&7  ||08-25-2010 ||All OK
 
|ABC module ?||[http://www.na-mic.org/Slicer/Download/Release/win32/Slicer3-3.6.1-2010-08-23-win32.exe Slicer3-3.6.1-2010-08-23] || Windows XP&7  ||08-25-2010 ||All OK
 
|}
 
|}
−
<references/>
 
−
 
−
 
  
 
* [http://www.na-mic.org/Wiki/index.php/MICCAI_2010 - MICCAI 2010, Beijing, China]
 
* [http://www.na-mic.org/Wiki/index.php/MICCAI_2010 - MICCAI 2010, Beijing, China]
 
** [http://www.na-mic.org/Wiki/index.php/File:HelloPython.zip Python Tutorial Data]
 
** [http://www.na-mic.org/Wiki/index.php/File:HelloPython.zip Python Tutorial Data]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 262: Line 425:
 
|-
 
|-
 
|[http://www.na-mic.org/Wiki/index.php/File:ProgrammingIntoSlicer3.6.1_Python_SoniaPujol.pdf Programming in Slicer3 with Python]||[http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20] || Mac Darwin ||08-30-2010||All OK
 
|[http://www.na-mic.org/Wiki/index.php/File:ProgrammingIntoSlicer3.6.1_Python_SoniaPujol.pdf Programming in Slicer3 with Python]||[http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20] || Mac Darwin ||08-30-2010||All OK
−
|-
 
 
|}
 
|}
−
<references/>
 
−
 
−
 
  
 
* [http://www.na-mic.org/Wiki/index.php/Beijing_2010_NA-MIC_Workshop - PLA General Hospital Tutorial, Beijing China]
 
* [http://www.na-mic.org/Wiki/index.php/Beijing_2010_NA-MIC_Workshop - PLA General Hospital Tutorial, Beijing China]
Line 272: Line 431:
 
**[http://www.slicer.org/slicerWiki/images/c/cf/DiffusionDataset.zip Diffusion Tutorial Data]
 
**[http://www.slicer.org/slicerWiki/images/c/cf/DiffusionDataset.zip Diffusion Tutorial Data]
 
**[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Neurosurgical Tutorial Data]
 
**[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Neurosurgical Tutorial Data]
−
<table>
+
 
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 300: Line 459:
 
|-
 
|-
 
|[http://www.slicer.org/slicerWiki/images/b/ba/SlicerNeurosurgeryTutorial-3.6.1.ppt Neurosurgical Planning]||[http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20] || Mac Darwin ||09-01-2010||All OK
 
|[http://www.slicer.org/slicerWiki/images/b/ba/SlicerNeurosurgeryTutorial-3.6.1.ppt Neurosurgical Planning]||[http://www.na-mic.org/Slicer/Download/Release/darwin-x86/Slicer3-3.6.1-2010-08-20-darwin-x86.tar.gz Slicer3-3.6.1-2010-08-20] || Mac Darwin ||09-01-2010||All OK
−
|-
 
 
|}
 
|}
−
<references/>
 
  
  
 
* [http://www.na-mic.org/Wiki/index.php/2010-Slicer-UNCDuke August 11, 2010 - UNC Duke Workshop]
 
* [http://www.na-mic.org/Wiki/index.php/2010-Slicer-UNCDuke August 11, 2010 - UNC Duke Workshop]
  
−
<table>
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 391: Line 547:
 
|-
 
|-
 
|Manual Registration ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-04-darwin-x86.tar.gz Slicer3-3.6-2010-08-04] ||Mac Darwin || 08-04-2010|| All OK
 
|Manual Registration ||[http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6-2010-08-04-darwin-x86.tar.gz Slicer3-3.6-2010-08-04] ||Mac Darwin || 08-04-2010|| All OK
−
|-
 
−
 
 
|}
 
|}
−
<references/>
 
−
 
  
 +
* [http://www.na-mic.org/Wiki/index.php/2010-Slicer-StLouis July 1st,2010- StLouis Workshop] Use Slicer3.6 release (under construction)
  
−
* [http://www.na-mic.org/Wiki/index.php/2010-Slicer-StLouis July 1st,2010- StLouis Workshop] Use Slicer3.6 release (under construction)
+
{| class="wikitable sortable labelpage labelpagetable" border="1"
−
<table>
 
−
{| class="wikitable sortable labelpage labelpagetable" border="1" align="left"}
 
 
|-
 
|-
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
 
|'''Tutorial Name'''||'''Slicer Version'''||'''Platform'''||'''Test Date'''||'''Comments/Mantis Links'''
Line 435: Line 586:
 
|-
 
|-
 
|Neurosurgical Planning|| [http://www.na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6-2010-06-10-linux-x86.tar.gz Slicer3-3.6-2010-06-10] || Linux x32|| 06-30-2010||All OK
 
|Neurosurgical Planning|| [http://www.na-mic.org/Slicer/Download/Release/linux-x86/Slicer3-3.6-2010-06-10-linux-x86.tar.gz Slicer3-3.6-2010-06-10] || Linux x32|| 06-30-2010||All OK
−
|-
 
 
|}
 
|}
−
<references/>
 

Latest revision as of 18:20, 11 April 2023

Home < Journal of Slicer Workshop Tests

Concept

This page will be used as a journal of tests for the Slicer workshops on four different platforms (Linux 32 and 64 bit, Mac Darwin, and Windows).

Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer4.0gamma2011-11-21 Mac OSX Lion 11/22/2011 slide 39: when downloading the label layer, the foreground

disappeared, it needs to be reselected. slide 76: when using the compare viewer, I only have the option to compare 2 views so I end up with 4 windows on the screen instead of 3. Every time I tried to go from lightbox viewer to conventional viewer (last slide of the part 4), Slicer crashed. When I tried without data loaded to switch between the two I have no problem, it seems linked to the dataset. Closing the scene at the end of part4 or part 5 of the tutorial causes Slicer to crash. (Valerie Humblet)

Abdominal CT scan with AAA (Osirix Panoramix Dataset) Slicer4.0gamma2011-11-21 Mac OSX Lion 11/22/2011 cropping, volume rendering and GPU: OK, did not test annotations. No problem when closing the scene (Valerie Humblet)
Prostate data Slicer4.0gamma2011-11-21 Mac OSX Lion 11/22/2011
Prostate data RSNA 2011 in progress Slicer4.0gamma2011-11-21 Mac OSX Lion 11/22/2011 Unable to unzip the file. It shows as .zip.download (Valerie Humblet)
Quantitative imaging Slicer4.0gamma2011-11-23 Mac OsX Lion 11/23/2011 Slicer3 minutes: OK; PET/CT (using volumes and SUV computation): OK; Change tracker: Need to use the volume rendering module to view VOI widget in 3D viewer, does not appear automatically, close scene causes Slicer to crash (Valerie Humblet)
Quantitative imaging Slicer4.0gamma2011-11-23 Windows 2008 32 bits Vista 11/23/2011 Slicer3 minutes: OK; PET/CT (using volumes and SUV computation): OK; Change tracker: Need to use the volume rendering module to view VOI widget in 3D viewer, does not appear automatically, close scene causes Slicer to crash (Valerie Humblet)
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Linux 32 06-08-2011 OK on Ubuntu 10.10 32-bit (Junichi Tokuda)
Data Loading and 3D Visualization Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Linux 64 06-08-2011 OK on Fedora 14 64-bit (Atsushi)
Data Loading and 3D Visualization Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Mac Darwin OK (Sonia Pujol)
Data Loading and 3D Visualization Slicer3-3.6.3-2011-06-07-win32.exe Windows XP 06-09-2011 OK (Junichi Tokuda)
Data Loading and 3D Visualization Slicer3-3.6.3-2011-06-07-win32.exe Windows 7 06-07-2011 Laurent Chauvin

Slow on Windows 7 (64 bits). First two times, Slicer crashed (first time when window opened after clicking Add Volume, second time when I tried to switch to Data module)

Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Linux 32 06-08-2011 OK on Ubuntu 10.10 (32-bit) (Junichi)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Linux 64 06-08-2011 Atsushi

DTI volume was displayed with strange colors, or Slicer was crushed when I set Select the Scalar Mode to "Color By Orientation" on Fedora 14 64bit.

Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Mac Darwin 06-09-2011 OK (Sonia Pujol)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-06-07-win32.exe Windows XP 06-08-2011 OK (Junichi Tokuda)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-06-07-win32.exe Windows 7 06-07-2011 Laurent Chauvin

Too slow to draw a line in grow cut mode (just points, but it's working. One crash: Uncaught exception: bad allocation.

HelloPython Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Linux 32 06-08-2011 OK on Ubuntu 10.10 (32-bit)(Junichi)
HelloPython Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Linux 64 06-09-2011 Atsushi

When adding "inputVolume = scene.GetNodeByID(HelloPythonInputVolume)" to the source code, "Python HelloPython" was disappeared from the module list. So, I was not able to execute this module on Fedora 14 64bit. The binary version are Slicer3-3.6.3-2011-06-07-linux-x86_64 and Slicer3-3.6.3-2011-03-04-linux-x86_64.

HelloPython Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Mac Darwin 06-09-2011 OK (Sonia Pujol)
HelloPython Slicer3-3.6.3-2011-06-07-win32.exe Windows XP 06-09-2011 OK (Junichi Tokuda)
HelloPython Slicer3-3.6.3-2011-06-07-win32.exe Windows 7 06-08-2011 Laurent Chauvin

Becareful when modifying HelloPython.py , Python is tab sensitive.

OpenIGTLink Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Linux 32 06-07-2011 OK on Ubuntu 10.10 (32-bit) (Junichi Tokuda)
OpenIGTLink Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Linux 64 06-09-2011 OK on Fedora 14 (64-bit) (Atsushi)
OpenIGTLink Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Mac Darwin OK( Sonia Pujol)
OpenIGTLink Slicer3-3.6.3-2011-06-07-win32.exe Windows XP 06-09-2011 OK (Junichi Tokuda)
OpenIGTLink Slicer3-3.6.3-2011-06-07-win32.exe Windows 7 06-07-2011 Laurent Chauvin
BRAINSFIT Registration Slicer3-3.6.3-2011-06-07-linux-x86.tar.gz Linux 32 06-09-2011 OK (Junichi Tokuda)
BRAINSFIT Registration Slicer3-3.6.3-2011-06-07-linux-x86_64.tar.gz Linux 64 06-10-2011 OK (Danielle Pace)
BRAINSFIT Registration Slicer3-3.6.3-2011-06-07-darwin-x86.tar.gz Mac Darwin -when loading the scene, Slicer displays a warning that the users should ignore

-for visualizing the glyphs, you need to tell the participants to put DTI_iso in Bg viewer - when select 'glyphs on display' with Scalar Mode 'Color by orientation', the glyphs are correctly displayed in the 3D viewer but all the 2D views are wrong -registration and resampling test work on MacBook Pro (8GB RAM) (Sonia Pujol) NOTE: Glyphs removed from tutorial (Danielle Pace)

BRAINSFIT Registration Slicer3-3.6.3-2011-06-07-win32.exe Windows XP 06-09-2011 Error on final "Resample DTI Volume" step - Filed to allocat memory for image. (Junichi Tokuda)
BRAINSFIT Registration Slicer3-3.6.3-2011-06-07-win32.exe Windows 7 06-09-2011 Danielle Error on final "Resample DTI Volume" step - memory error, unable to allocate 77856768 elements of size 4 bytes

Laurent Chauvin: Unable to complete last step. Message: Completed with errors, but no more informations about error.

Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization - UCSF Version Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Linux 32 04/4/11 OK (Hayes)
Data Loading and 3D Visualization - UCSF Version Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Linux 64 04/1/11 OK (SPujol)
Data Loading and 3D Visualization - UCSF Version Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Mac Darwin 04/1/11 OK (SPujol)
Data Loading and 3D Visualization - UCSF Version Slicer3-3.6.3-2011-03-04-win32.exe Windows XP&7 04/4/11 OK (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Linux 32 04/04/11 OK (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Linux 64 04/1/11 OK (SPujol)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Mac Darwin 04/1/11 OK (SPujol)
Exploring peritumoral white matter fibers for neurosurgical planning Slicer3-3.6.3-2011-03-04-win32.exe Windows XP&7 04/04/11 OK (Hayes)
Diffusion Tensor Imaging - UCSF Version Slicer3-3.6.3-2011-03-04-linux-x86.tar.gz Linux 32 04/04/11 OK (Hayes)
Diffusion Tensor Imaging - UCSF Version Slicer3-3.6.3-2011-03-04-linux-x86_64.tar.gz Linux 64 04/1/11 OK (SPujol)
Diffusion Tensor Imaging - UCSF Version Slicer3-3.6.3-2011-03-04-darwin-x86.tar.gz Mac Darwin 04/1/11 OK (SPujol)
Diffusion Tensor Imaging - UCSF Version Slicer3-3.6.3-2011-03-04-win32.exe Windows XP&7 04/04/11 OK (Hayes)
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization - UCSF Version 3.6.3-RC2 Linux 32 03/04/11 Crashes when VTK models are rotated in 3D viewer (Hayes) (anago.nmr) Bug Report
Data Loading and 3D Visualization - UCSF Version 3.6.3-RC2 Linux 64 03/04/11 OK (Hayes) (panamint.nmr)
Data Loading and 3D Visualization - UCSF Version 3.6.3-RC2 Mac Darwin 03/04/11 Crashes when VTK models are rotated in 3D viewer (Hayes) (hima.nmr) Bug Report
Data Loading and 3D Visualization - UCSF Version 3.6.3-RC2 Windows XP&7 N/A Testing Slicer3-3.6.3-2011-03-04 instead
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Linux 32 N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Linux 64 N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Mac Darwin N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Windows XP&7 N/A Waiting on completed slides (Hayes)
Diffusion Tensor Imaging - UCSF Version 3.6.3-RC2 Linux 32 N/A Testing Slicer3-3.6.3-2011-03-04 instead
Diffusion Tensor Imaging - UCSF Version 3.6.3-RC2 Linux 64 N/A Testing Slicer3-3.6.3-2011-03-04 instead
Diffusion Tensor Imaging - UCSF Version 3.6.3-RC2 Mac Darwin N/A Testing Slicer3-3.6.3-2011-03-04 instead
Diffusion Tensor Imaging - UCSF Version 3.6.3-RC2 Windows XP&7 N/A Testing Slicer3-3.6.3-2011-03-04 instead
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization 3.6.3-RC2 Linux 32 03/03/11 OK (Hayes) (anago.nmr)
Data Loading and 3D Visualization 3.6.3-RC2 Linux 64 02/28/11 OK, slides need updating (Hayes) (panamint.nmr)
Data Loading and 3D Visualization 3.6.3-RC2 Mac Darwin 03/02/11 Crashes when VTK models are rotated in 3D viewer (Hayes) (hima.nmr) Bug Report
Data Loading and 3D Visualization 3.6.3-RC2 Windows XP&7 N/A Testing UCSF slides instead
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Linux 32 N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Linux 64 N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Mac Darwin N/A Waiting on completed slides (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC2 Windows XP&7 N/A Waiting on completed slides (Hayes)
Diffusion Tensor Imaging 3.6.3-RC2 Linux 32 03/03/11 OK (Hayes) (anago.nmr)
Diffusion Tensor Imaging 3.6.3-RC2 Linux 64 02/28/11 OK pending minor slide edits (Hayes) (panamint.nmr)
Diffusion Tensor Imaging 3.6.3-RC2 Mac Darwin 03/03/11 OK (Hayes) (hima.nmr)
Diffusion Tensor Imaging 3.6.3-RC2 Windows XP&7 N/A Testing UCSF slides instead
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization 3.6.3-RC1 Linux 32 02/24/11 Crashes on startup (Hayes) Bug Report
Data Loading and 3D Visualization 3.6.3-RC1 Linux 64 02/24/11 Crashes on startup (Hayes) Bug Report
Data Loading and 3D Visualization 3.6.3-RC1 Mac Darwin N/A Testing 3.6.3 RC2 instead (Hayes)
Data Loading and 3D Visualization 3.6.3-RC1 Windows XP&7 N/A Testing 3.6.3 RC2 instead (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC1 Linux 32 02/24/11 Crashes on startup (Hayes) Bug Report
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC1 Linux 64 02/24/11 Crashes on startup (Hayes) Bug Report
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC1 Mac Darwin N/A Testing 3.6.3 RC2 instead (Hayes)
Exploring peritumoral white matter fibers for neurosurgical planning 3.6.3-RC1 Windows XP&7 N/A Testing 3.6.3 RC2 instead (Hayes)
Diffusion Tensor Imaging 3.6.3-RC1 Linux 32 02/24/11 Crashes on startup (Hayes) Bug Report
Diffusion Tensor Imaging 3.6.3-RC1 Linux 64 02/24/11 Crashes on startup (Hayes) Bug Report
Diffusion Tensor Imaging 3.6.3-RC1 Mac Darwin N/A Testing 3.6.3 RC2 instead (Hayes)
Diffusion Tensor Imaging 3.6.3-RC1 Windows XP&7 N/A Testing 3.6.3 RC2 instead (Hayes)
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
CTSA Tutorial Slides Mac Darwin (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz) Mac 12-03-2010 OK (tested by SPujol)
CTSA Tutorial Slides Linux 64 (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64) Linux 64 12-03-2010 OK (tested by SPujol)
CTSA Tutorial Slides Windows (Slicer3-3.6.2-2010-12-03-win32.exe) Windows XP & Windows 7 12-03-2010 OK (tested by SPujol)
OpenIGTLink OpenIGTLink Slides Windows (Slicer3-3.6.2-2010-12-03-win32.exe) Windows XP 12-04-2010 OK (Tested by Junichi)
OpenIGTLink OpenIGTLink Slides Mac Darwin (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz) Mac Darwin 12-04-2010 OK (Tested by Junichi)
OpenIGTLink OpenIGTLink Slides Linux 64 (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64) Linux 64 12-04-2010 OK (Tested by Junichi)
Interactive Editor Slides Mac Darwin (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz) Mac 12-05-2010 OK (Tested by Junichi)
Interactive Editor Slides Linux 64 (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64) Linux 64 12-04-2010 OK (tested by SPujol)
Interactive Editor Slides Windows (Slicer3-3.6.2-2010-12-03-win32.exe) Windows XP & Windows 7 12-04-2010 OK (tested by SPujol)
Diffusion Tensor Imaging Slides Mac Darwin (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz) Mac 12-06-2010 OK (Tested by Junichi)
Diffusion Tensor Imaging Slides Linux 64 (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz Linux-x64) Linux 64 12-04-2010 OK (tested by SPujol)
Diffusion Tensor Imaging Slides Windows (Slicer3-3.6.2-2010-12-03-win32.exe) Windows XP & Windows 7 12-04-2010 OK (tested by SPujol)


Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
3D Interactive Visualization of DICOM Images for Radiology Applications http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz Mac 11-2-2010 All OK
3D Interactive Visualization of DICOM Images for Radiology Applications http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz Linux 32 11-2-2010 All OK
3D Interactive Visualization of DICOM Images for Radiology Applications http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz Linux 64 11-2-2010 All OK
3D Interactive Visualization of DICOM Images for Radiology Applications http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-win32.exe Win XP&7 11-2-2010 All OK
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
draft target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz Mac 11-2-2010 All OK
draft target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz Linux 32 11-2-2010 All OK
draft target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz Linux 64 11-2-2010 All OK
Target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-darwin-x86.tar.gz Mac - -
Target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86.tar.gz Linux 32 - -
Target tutorial slides http://boggs.bwh.harvard.edu/slicer/3.6.2-RC1/Slicer3-3.6.2-2010-10-22-linux-x86_64.tar.gz Linux 64 - -
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
QIRR Presentation (presentation only, no tutorial) -- -- -- --


Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Linux 32 09-03-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Linux 64 08-27-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Mac Darwin 08-25-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
Interactive Editing Slicer3-3.6.1-2010-08-20 Linux 32 09-02-2010 All OK
Interactive Editing Slicer3-3.6.1-2010-08-23 Linux 64 08-27-2010 All OK
Interactive Editing Slicer3-3.6.1-2010-08-20 Mac Darwin 08-25-2010 All OK
Interactive Editing Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-20 Linux 32 09-02-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-23 Linux 64 08-27-2010 All OK
Manual Registration Slicer3-3.6.12010-08-20 Mac Darwin 08-25-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Linux 32 09-03-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Linux 64 08-27-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Mac Darwin 08-25-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-20 Linux 32 09-02-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-23 Linux 64 08-27-2010 All OK
Manual Registration Slicer3-3.6.12010-08-20 Mac Darwin 08-25-2010 All OK
Manual Registration Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
ABC module ? Slicer3-3.6.1-2010-08-23 Windows XP&7 08-25-2010 All OK
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Programming in Slicer3 with Python Slicer3-3.6.1-2010-08-23 Linux x64 08-27-2010 All OK
Programming in Slicer3 with Python Slicer3-3.6.1-2010-08-20 Linux 32 08-27-2010 All OK
Programming in Slicer3 with Python Slicer3-3.6.1-2010-08-23 Windows XP & 7 08-30-2010 All OK
Programming in Slicer3 with Python Slicer3-3.6.1-2010-08-20 Mac Darwin 08-30-2010 All OK
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Linux x64 08-27-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Linux 32 08-27-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-23 Windows XP & 7 08-30-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6.1-2010-08-20 Mac Darwin 08-30-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6.1-2010-08-23 Linux x64 08-27-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6.1-2010-08-20 Linux 32 08-27-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6.1-2010-08-23 Windows XP & 7 08-30-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6.1-2010-08-20 Mac Darwin 08-30-2010 All OK
Neurosurgical Planning Slicer3-3.6.1-2010-08-23 Linux x64 09-01-2010 All OK
Neurosurgical Planning Slicer3-3.6.1-2010-08-20 Linux 32 09-01-2010 All OK
Neurosurgical Planning Slicer3-3.6.1-2010-08-23 Windows XP & 7 09-01-2010 All OK
Neurosurgical Planning Slicer3-3.6.1-2010-08-20 Mac Darwin 09-01-2010 All OK


Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Data Loading and 3D Visualization Slicer3-3.6-2010-08-05 Linux x64 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-05 Linux 32 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-05 Mac Darwin 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-05 Windows XP 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-05 Windows 7 08-08-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-05 Linux x64 08-08-2010 All OK with Thresholding tweak
Interactive Editing Slicer3-3.6-2010-08-05 Linux 32 08-08-2010 All OK with Thresholding tweak
Interactive Editing Slicer3-3.6-2010-08-05 Windows XP 08-09-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-05 Windows 7 08-09-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-05 Mac Darwin 08-08-2010 All OK with Thresholding tweak
Diffusion Tensor Imaging Slicer3-3.6-2010-08-05 Linux x64 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-05 Linux 32 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-05 Windows XP 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-05 Windows 7 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-05 Mac Darwin 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-05 Linux x64 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-05 Linux 32 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-05 Windows XP 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-05 Windows 7 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-05 Mac Darwin 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-02 Linux x64 08-07-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-03 Linux 32 08-07-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-04 Mac Darwin 08-04-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-03 Windows XP 08-08-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-08-03 Windows 7 08-08-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-02 Linux x64 08-05-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-03 Linux 32 08-07-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-03 Windows XP 08-08-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-03 Windows 7 08-08-2010 All OK
Interactive Editing Slicer3-3.6-2010-08-04 Mac Darwin 08-04-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-02 Linux x64 08-06-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-03 Linux 32 08-07-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-03 Windows XP 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-03 Windows 7 08-08-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-08-04 Mac Darwin 08-04-2010 All OK
Manual Registration Slicer3-3.6-2010-08-02 Linux x64 08-07-2010 All OK
Manual Registration Slicer3-3.6-2010-08-03 Linux 32 08-07-2010 All OK
Manual Registration Slicer3-3.6-2010-08-03 Windows XP 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-03 Windows 7 08-08-2010 All OK
Manual Registration Slicer3-3.6-2010-08-04 Mac Darwin 08-04-2010 All OK
Tutorial Name Slicer Version Platform Test Date Comments/Mantis Links
Interactive Editing Slicer3-3.6-2010-06-10 Linux x64 06-25-2010 All OK
Interactive Editing Slicer3-3.6-2010-06-10 Windows XP&7 06-25-2010 All OK
Interactive Editing Slicer3-3.6-2010-06-10 Mac Darwin 06-25-2010 All OK
Interactive Editing Slicer3-3.6-2010-06-10 Linux x32 06-25-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-06-10 Linux x64 06-11-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-06-10 Windows XP 06-11-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-06-10 Mac Darwin 06-11-2010 All OK
Data Loading and 3D Visualization Slicer3-3.6-2010-06-10 Linux x32] 06-11-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-06-10 Linux x64 06-11-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-06-10 Windows XP 06-11-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-06-10 Mac Darwin 06-11-2010 All OK
Diffusion Tensor Imaging Slicer3-3.6-2010-06-10 Linux x32 06-11-2010 All OK
Neurosurgical Planning Slicer3-3.6-2010-06-10 Linux x64 06-30-2010 All OK
Neurosurgical Planning Slicer3-3.6-2010-06-10 Windows XP 06-30-2010 All OK
Neurosurgical Planning Slicer3-3.6-2010-06-10 Mac Darwin 06-30-2010 All OK
Neurosurgical Planning Slicer3-3.6-2010-06-10 Linux x32 06-30-2010 All OK
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