Difference between revisions of "2011 Algorithms Retreat"

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*12:pm-1:30pm - Lunch
 
*12:pm-1:30pm - Lunch
 
*1:30pm-5:pm (with break) - Technical presentations (10-20mins each + discussions):
 
*1:30pm-5:pm (with break) - Technical presentations (10-20mins each + discussions):
**TBD
 
 
**Shape Growth Trajectories from Time Series Data (James, Guido)
 
**Shape Growth Trajectories from Time Series Data (James, Guido)
**Patient-specific segmentation of longitudinal multi-channel MRI in TBI (Guido)
+
**Patient-specific segmentation of longitudinal multi-channel MRI in TBI (Bo Wang,Guido)
 +
**Spatiotemporal anatomical models via 4D segmentation (Marcel, Suyash, Guido, ..)
 +
**Shape Correspondence (Manasi Datar)
 +
**UNC update (Martin Styner), [[media:UNC_Core1_overview.pptx‎ | PPTX Presentation link]]
 +
*** DTI QC using directional entropy
 +
*** DTI Tensor calibration for registration
 +
*** Entropy over normals for particle correspondence
 +
*** Human brain like DTI phantom for evaluating tractography
 +
*** Atlas based DTI fiber tract analysis tools for Slicer, [[media:UNC_core1_FiberViewerLight_DTIAtlasAnalyzer.ppt‎ | Presentation by Jean-Baptiste Berger with details]]
 +
**NonParametric Segmentation (Amelia Arbisser, Christian Wachinger, Polina Golland)
 +
**Images Spaces (Ramesh Sridharan, Adrian Dalca, Polina Golland)
 +
**Interactive Segmentation (Peter Karasev, Allen Tannenbaum)
 +
**Information Based Registration (Yifei Lou, Allen Tannnebaum)
 +
**Progress on Afib (Yi Gao, Allen Tannenbaum)
 +
**Joint modeling of anatomical and functional connectivity (Archana Venkataraman, Polina Golland)
 +
**"What I am doing for NA-MIC" : Overviews from PIs and Distinguished Guests
 +
 
 +
*Dinner at Capt. Carlo's, reservation for 7pm
 +
  27-29 Harbor Loop
 +
  Gloucester, MA 01930
 +
  Phone: (978) 283-6342
 +
  www.captcarlo.com
  
 
==Saturday==
 
==Saturday==
 
*8:00am--9:00am: Discussion of Core 1 logistics/organization (and NAMIC)
 
*8:00am--9:00am: Discussion of Core 1 logistics/organization (and NAMIC)
*9:00am--12:00pm: Discussion of future plans
+
*9:00am--12:00pm: Discussion of future plans. Some of the options are:
 +
**competitive renewal (currently not an option, some discussions at NIH).
 +
**smaller grants: sliced vertically or horizontally
  
 
=Attendees=
 
=Attendees=
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* Guido Gerig (Utah)
 
* Guido Gerig (Utah)
 
* James Fishbaugh (Utah)
 
* James Fishbaugh (Utah)
 +
* Ron Kikinis (BWH SPL)
 +
* Marc Niethammer (UNC)
 +
* Martin Styner (UNC)
 +
* Allen Tannenbaum (BU)
 +
* Sandy Wells (BWH SPL)
 +
* Polina Golland (MIT)
 +
* Adrian Dalca (MIT)
 +
* Ramesh Sridharan (MIT)
 +
* Christian Wachinger (MIT)
 +
* Fern DeOliveira (MIT)

Latest revision as of 20:46, 16 October 2011

Home < 2011 Algorithms Retreat
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Agenda

Friday

  • 9:00am--12:00pm (with break)
    • DBP discussions. Updates on progress and status including people, software, data, algorithms.
      • Afib (Ross, Allen)
      • Head&Neck Cancer (Polina)
      • Huntington's (Martin)
      • TBI (Guido)
      • Discussions of logistics with DBPs
  • 12:pm-1:30pm - Lunch
  • 1:30pm-5:pm (with break) - Technical presentations (10-20mins each + discussions):
    • Shape Growth Trajectories from Time Series Data (James, Guido)
    • Patient-specific segmentation of longitudinal multi-channel MRI in TBI (Bo Wang,Guido)
    • Spatiotemporal anatomical models via 4D segmentation (Marcel, Suyash, Guido, ..)
    • Shape Correspondence (Manasi Datar)
    • UNC update (Martin Styner), PPTX Presentation link
      • DTI QC using directional entropy
      • DTI Tensor calibration for registration
      • Entropy over normals for particle correspondence
      • Human brain like DTI phantom for evaluating tractography
      • Atlas based DTI fiber tract analysis tools for Slicer, Presentation by Jean-Baptiste Berger with details
    • NonParametric Segmentation (Amelia Arbisser, Christian Wachinger, Polina Golland)
    • Images Spaces (Ramesh Sridharan, Adrian Dalca, Polina Golland)
    • Interactive Segmentation (Peter Karasev, Allen Tannenbaum)
    • Information Based Registration (Yifei Lou, Allen Tannnebaum)
    • Progress on Afib (Yi Gao, Allen Tannenbaum)
    • Joint modeling of anatomical and functional connectivity (Archana Venkataraman, Polina Golland)
    • "What I am doing for NA-MIC" : Overviews from PIs and Distinguished Guests
  • Dinner at Capt. Carlo's, reservation for 7pm
 27-29 Harbor Loop
 Gloucester, MA 01930
 Phone: (978) 283-6342
 www.captcarlo.com

Saturday

  • 8:00am--9:00am: Discussion of Core 1 logistics/organization (and NAMIC)
  • 9:00am--12:00pm: Discussion of future plans. Some of the options are:
    • competitive renewal (currently not an option, some discussions at NIH).
    • smaller grants: sliced vertically or horizontally

Attendees

  • Ross Whitaker (Utah)
  • Manasi Datar (Utah)
  • Guido Gerig (Utah)
  • James Fishbaugh (Utah)
  • Ron Kikinis (BWH SPL)
  • Marc Niethammer (UNC)
  • Martin Styner (UNC)
  • Allen Tannenbaum (BU)
  • Sandy Wells (BWH SPL)
  • Polina Golland (MIT)
  • Adrian Dalca (MIT)
  • Ramesh Sridharan (MIT)
  • Christian Wachinger (MIT)
  • Fern DeOliveira (MIT)