Difference between revisions of "Events: DTI Tractography Challenge"
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The DTI Challenge workshop was held at the MICCAI 2011 conference in Toronto, Canada. Please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge_MICCAI_2011 workshop page ] of the event for details on the organization. | The DTI Challenge workshop was held at the MICCAI 2011 conference in Toronto, Canada. Please visit the [http://www.na-mic.org/Wiki/index.php/Events:_DTI_Tractography_Challenge_MICCAI_2011 workshop page ] of the event for details on the organization. | ||
| − | This page will gather material on the on-going effort and workshop outcomes. | + | This page will gather material on the [[Events:DTI_Tractography_Challenge_MICCAI_2012| on-going effort]] and workshop outcomes. |
(Page under construction) | (Page under construction) | ||
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== Teams participating in the challenge == | == Teams participating in the challenge == | ||
| − | * Olivier | + | * Olivier Commowick, Aymeric Stamm, INRIA Rennes, France |
* Caroline Brun, UPenn, Philadelphia, USA | * Caroline Brun, UPenn, Philadelphia, USA | ||
* Alonso Ramirez, Ramon Aranda, University of Guanajuato, Mexico | * Alonso Ramirez, Ramon Aranda, University of Guanajuato, Mexico | ||
| − | * Maged Goubran, Robarts Research Institute, Toronto, Canada | + | * Maged Goubran, Ali Khan, Robarts Research Institute, Toronto, Canada |
* Gopal Veni, Scientific Computing and Imaging Institute, Salt Lake City, USA | * Gopal Veni, Scientific Computing and Imaging Institute, Salt Lake City, USA | ||
* Guang Cheng, University of Florida, USA | * Guang Cheng, University of Florida, USA | ||
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*The atlas is freely available. For a download, see [http://www.spl.harvard.edu/publications/item/view/1265 here]. In addition to the label maps, it is configured to be loaded into 3D Slicer. Several preconfigured views are available. | *The atlas is freely available. For a download, see [http://www.spl.harvard.edu/publications/item/view/1265 here]. In addition to the label maps, it is configured to be loaded into 3D Slicer. Several preconfigured views are available. | ||
*For more information about where the CST is located in the posterior limb in the internal capsule and spinal cord, have a look at the picture in this [http://academic.regis.edu/rcloues/Diencephalon_files/slide0027_image007.jpg link]. | *For more information about where the CST is located in the posterior limb in the internal capsule and spinal cord, have a look at the picture in this [http://academic.regis.edu/rcloues/Diencephalon_files/slide0027_image007.jpg link]. | ||
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| + | ==Workshop Datasets== | ||
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| + | The workshop datasets are available to the scientific and clinical community. To request an access to the datasets, please send an e-mail to Sonia Pujol (spujol at bwh.harvard.edu) with your name, contact information, and a brief description of how you intend to use the challenge data. | ||
Latest revision as of 08:29, 10 January 2012
Home < Events: DTI Tractography ChallengeThe DTI Challenge workshop was held at the MICCAI 2011 conference in Toronto, Canada. Please visit the workshop page of the event for details on the organization.
This page will gather material on the on-going effort and workshop outcomes.
(Page under construction)
Contents
Workshop Faculty
- Sonia Pujol, Ph.D., Surgical Planning Laboratory, Brigham and Women’s Hospital, Harvard Medical School
- Ron Kikinis, M.D., Surgical Planning Laboratory, Brigham and Women’s Hospital, Harvard Medical School
- Alexandra Golby, M.D., Department of Neurosurgery, Brigham and Women’s Hospital, Harvard Medical School
- Guido Gerig, Ph.D.,The Scientific Computing and Imaging Institute, University of Utah
- Martin Styner, Ph.D., Neuro Image Research and Analysis Laboratory, University of North Carolina
- William Wells, Ph.D., Surgical Planning Laboratory, Brigham and Women’s Hospital, Harvard Medical School
- Carl-Fredrik Westin, Ph.D., Laboratory of Mathematics in Imaging, Brigham and Women’s Hospital, Harvard Medical School
- Sylvain Gouttard, M.Sc.,The Scientific Computing and Imaging Institute, University of Utah
- Arya Nabavi, M.D., Department of Neurosurgery, University Hospital Schleswig-Holstein, Kiel, Germany
Teams participating in the challenge
- Olivier Commowick, Aymeric Stamm, INRIA Rennes, France
- Caroline Brun, UPenn, Philadelphia, USA
- Alonso Ramirez, Ramon Aranda, University of Guanajuato, Mexico
- Maged Goubran, Ali Khan, Robarts Research Institute, Toronto, Canada
- Gopal Veni, Scientific Computing and Imaging Institute, Salt Lake City, USA
- Guang Cheng, University of Florida, USA
- Antonio Tristan-Vega, Laboratory of Mathematics in Imaging, Boston, USA
- Peter Neher, German Cancer Research Centre, Heidelberg, Germany
- Yundi Shi, UNC Chapell Hill, USA
Corticospinal tract definition
| |||||
- Cortico Spinal Tract (CST), from the 2008 edition of the PNL SPL brain atlas
CST and surrounding structures: Putamen blue, caudate nucleus in brown, lateral ventricles in green
3d rendering of the CST. Motor Cortex in Yellow, CST in white, thalamic nuclei in multiple colors
3d rendering of the CST, view from below
- The atlas is freely available. For a download, see here. In addition to the label maps, it is configured to be loaded into 3D Slicer. Several preconfigured views are available.
- For more information about where the CST is located in the posterior limb in the internal capsule and spinal cord, have a look at the picture in this link.
Workshop Datasets
The workshop datasets are available to the scientific and clinical community. To request an access to the datasets, please send an e-mail to Sonia Pujol (spujol at bwh.harvard.edu) with your name, contact information, and a brief description of how you intend to use the challenge data.
