Difference between revisions of "SegmentationAidedRegistration"
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== Slicer Module == | == Slicer Module == | ||
The registration is delivered as a Extension module for Slicer3. It can be installed from the Extension manager. Below in Figure R1 we show the GUI of the module. We need to feed the pre/post-MRI and pre/post-Endocardium images. The module then compute the registration from the post-op MRI to the pre-op MRI. | The registration is delivered as a Extension module for Slicer3. It can be installed from the Extension manager. Below in Figure R1 we show the GUI of the module. We need to feed the pre/post-MRI and pre/post-Endocardium images. The module then compute the registration from the post-op MRI to the pre-op MRI. | ||
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| + | Module wiki page on Slicer wiki at: | ||
| + | https://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration | ||
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<gallery> | <gallery> | ||
Image:AFibLongitudinalRegGUI.png|Figure R1. registration GUI in Slicer3 Extension manager | Image:AFibLongitudinalRegGUI.png|Figure R1. registration GUI in Slicer3 Extension manager | ||
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Image:SegAidedRegSquareFocus128.png|Figure. Icon for the module | Image:SegAidedRegSquareFocus128.png|Figure. Icon for the module | ||
</gallery> | </gallery> | ||
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| + | GUI and one case screenshot | ||
| + | <gallery> | ||
| + | Image:SegmentationAidedRegistrationUsageScreenShot.png|Figure. GUI and one case screenshot | ||
| + | </gallery> | ||
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| + | = References = | ||
| + | * Y Gao, Y Rathi, S Bouix, A Tannenbaum; Filtering in the Diffeomorphism Group and the Registration of Point Sets; IEEE Transactions on Image Processing 21 (10), 4383--4396 | ||
| + | * Y Gao, B Gholami, RS MacLeod, J Blauer, WM Haddad, A Tannenbaum; [http://www.na-mic.org/publications/item/view/1844 Segmentation of the Endocardial Wall of the Left Atrium using Local Region-Based Active Contours and Statistical Shape Learning.] Proceedings of SPIE Medical Imaging 2010. | ||
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| + | = Key Investigators = | ||
| + | * Brigham and Women's Hospital: Yi Gao, Sylvain Bouix | ||
| + | * University of Alabama at Birmingham: Liang-Jia Zhu, Allen Tannenbaum | ||
| + | * University of Utah: Josh Cates, Alan Morris, Danny Perry, Greg Gardner, Rob MacLeod | ||
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| + | * Contact: Yi Gao gaoyi@bwh.harvard.edu | ||
Latest revision as of 17:31, 10 July 2017
Home < SegmentationAidedRegistrationSlicer Module
The registration is delivered as a Extension module for Slicer3. It can be installed from the Extension manager. Below in Figure R1 we show the GUI of the module. We need to feed the pre/post-MRI and pre/post-Endocardium images. The module then compute the registration from the post-op MRI to the pre-op MRI.
Module wiki page on Slicer wiki at: https://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration
Figure R1. registration GUI in Slicer3 Extension manager
Module icon
Figure. Icon for the module
GUI and one case screenshot
Figure. GUI and one case screenshot
References
- Y Gao, Y Rathi, S Bouix, A Tannenbaum; Filtering in the Diffeomorphism Group and the Registration of Point Sets; IEEE Transactions on Image Processing 21 (10), 4383--4396
- Y Gao, B Gholami, RS MacLeod, J Blauer, WM Haddad, A Tannenbaum; Segmentation of the Endocardial Wall of the Left Atrium using Local Region-Based Active Contours and Statistical Shape Learning. Proceedings of SPIE Medical Imaging 2010.
Key Investigators
- Brigham and Women's Hospital: Yi Gao, Sylvain Bouix
- University of Alabama at Birmingham: Liang-Jia Zhu, Allen Tannenbaum
- University of Utah: Josh Cates, Alan Morris, Danny Perry, Greg Gardner, Rob MacLeod
- Contact: Yi Gao gaoyi@bwh.harvard.edu
