Difference between revisions of "2014 Winter Project Week:Steered Registration"

From NAMIC Wiki
Jump to: navigation, search
 
(11 intermediate revisions by 2 users not shown)
Line 2: Line 2:
 
<gallery>
 
<gallery>
 
Image:PW-SLC2014.png|[[2014_Winter_Project_Week#Projects|Projects List]]
 
Image:PW-SLC2014.png|[[2014_Winter_Project_Week#Projects|Projects List]]
 +
Image:Screen Shot 2014-01-06 at 3.38.00 PM.png
 +
<iframe width="560" height="315" src="//www.youtube.com/embed/H3NrkUh3ZJc" frameborder="0" allowfullscreen></iframe>
 
</gallery>
 
</gallery>
  
Line 11: Line 13:
 
* Princess Margaret Hospital: Kevin Wang
 
* Princess Margaret Hospital: Kevin Wang
 
* Queen's University: Csaba Pinter
 
* Queen's University: Csaba Pinter
 +
* University of Michigan: Vinicius Boen, Lucia Cevidanes
  
 
==Project Description==
 
==Project Description==
Line 18: Line 21:
 
<h3>Objective</h3>
 
<h3>Objective</h3>
 
* Review various use cases for interactive registration
 
* Review various use cases for interactive registration
 +
** RT
 +
** CMF (TMJ-OA)
 +
** Neurosurgery
 +
** Others?
 
* Review current work-in-progress
 
* Review current work-in-progress
−
** RegistrationPlugin architecture
+
** [https://github.com/pieper/LandmarkRegistration/tree/refactor-RegistrationLib RegistrationPlugin architecture]
 
** Integration with Hybrid BSpline HNC DBP Project
 
** Integration with Hybrid BSpline HNC DBP Project
−
* Identify high priority fixes / features
+
 
−
* Make a long-term plan
 
  
  
Line 28: Line 34:
 
<div style="width: 27%; float: left; padding-right: 3%;">
 
<div style="width: 27%; float: left; padding-right: 3%;">
 
<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
−
*  
+
* Identify high priority fixes / features
 +
** Ax/Sag/Cor button not working on CMF cases
 +
** Add surfaces, volume rendering
 +
** Auto placement of corresponding landmarks (registration)
 +
** [http://www.na-mic.org/Bug/view.php?id=3383 Interactive checkerboard viewer]
 +
* Make a long-term plan to coordinate among research efforts
  
 
</div>
 
</div>
 
<div style="width: 27%; float: left; padding-right: 3%;">
 
<div style="width: 27%; float: left; padding-right: 3%;">
 
<h3>Progress</h3>
 
<h3>Progress</h3>
−
*
+
* Met with multiple interest groups
 +
** TMJ-OA
 +
** SlicerRT
 +
** Plastimatch
 +
** BRAINS
 +
** Slicer Users
 +
* Plastimatch Hybrid B-Splines is now pluggable in nightly build LandmarkRegistration
 +
* Prototype RevealCursor [http://youtu.be/H3NrkUh3ZJc video on YouTube]
 +
* 'Reveal Cursor' feedback from from users
 +
** Scaled/Non-Scaled option for cursor
 +
** Checkerboard vs Non-checkerboard option (show label layer or foreground)
 
</div>
 
</div>
  
Line 39: Line 60:
  
 
* [[2013_Summer_Project_Week:Landmark_Registration|Summer Project Week page]]
 
* [[2013_Summer_Project_Week:Landmark_Registration|Summer Project Week page]]
−
* [https://github.com/pieper/LandmarkRegistration Source code for Landmark Registration]
+
* Source code
−
* [http://www.youtube.com/watch?v=IOJ0yLG5QEE Screen capture of registration] (note that the screen recording is much slower than using the tool in real life)
+
** [https://github.com/pieper/LandmarkRegistration Landmark Registration]
 +
*** [https://github.com/pieper/LandmarkRegistration/tree/refactor-RegistrationLib Branch with RegistrationPlugin support]
 +
*** [https://github.com/pieper/LandmarkRegistration/blob/refactor-RegistrationLib/RegistrationLib/AffinePlugin.py Example plugin]
 +
** [https://github.com/dirkpadfield/steeredReg Steered affine registration]
 +
** [https://github.com/prastawa/SteeredFluidRegistration Steered fluid registration]
 +
* Videos
 +
** [http://www.youtube.com/watch?v=IOJ0yLG5QEE Screen capture of landmark registration] (note that the screen recording is much slower than using the tool in real life)
 +
** [http://www.youtube.com/watch?v=LRA2wldGeEk Screen capture of steered fluid registration]

Latest revision as of 16:59, 10 January 2014

Home < 2014 Winter Project Week:Steered Registration

Key Investigators

  • Isomics: Steve Pieper
  • MGH: Greg Sharp
  • GE: Marcel Prastawa, Jim Miller
  • Princess Margaret Hospital: Kevin Wang
  • Queen's University: Csaba Pinter
  • University of Michigan: Vinicius Boen, Lucia Cevidanes

Project Description

Objective

  • Review various use cases for interactive registration
    • RT
    • CMF (TMJ-OA)
    • Neurosurgery
    • Others?
  • Review current work-in-progress


Approach, Plan

  • Identify high priority fixes / features
    • Ax/Sag/Cor button not working on CMF cases
    • Add surfaces, volume rendering
    • Auto placement of corresponding landmarks (registration)
    • Interactive checkerboard viewer
  • Make a long-term plan to coordinate among research efforts

Progress

  • Met with multiple interest groups
    • TMJ-OA
    • SlicerRT
    • Plastimatch
    • BRAINS
    • Slicer Users
  • Plastimatch Hybrid B-Splines is now pluggable in nightly build LandmarkRegistration
  • Prototype RevealCursor video on YouTube
  • 'Reveal Cursor' feedback from from users
    • Scaled/Non-Scaled option for cursor
    • Checkerboard vs Non-checkerboard option (show label layer or foreground)

Reference

Retrieved from "https://www.na-mic.org/w/index.php?title=2014_Winter_Project_Week:Steered_Registration&oldid=85068"