Difference between revisions of "Whole Body PET/CT Reference Region segmentation"
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==Project Description== | ==Project Description== | ||
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| + | * C. Bauer et al. (2012): Automated Measurement of Uptake in Cerebellum, Liver, and Aortic Arch in Full-body FDG PET/CT Scans | ||
| + | * http://scitation.aip.org/content/aapm/journal/medphys/39/6/10.1118/1.4711815 | ||
| + | |||
| + | [[File:Pet_reference_regions.png|800px|Examples of PET reference regions segmentations]] | ||
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<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | * Create slicer | + | * Create slicer Slicer CLIs to identify liver, aortic arch and cerebellum regions in whole body FDG-18 PET/CT scans |
| − | |||
| − | |||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
| Line 19: | Line 23: | ||
* Consolidate current source code | * Consolidate current source code | ||
* Wrap into Slicer CLI | * Wrap into Slicer CLI | ||
| + | * internally brain segmentation required | ||
* Start with liver region | * Start with liver region | ||
* Add aortic arch region | * Add aortic arch region | ||
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<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| + | * Implemented Slicer CLI for segmentation of brain | ||
* Implemented Slicer CLI for segmentation of liver reference region | * Implemented Slicer CLI for segmentation of liver reference region | ||
</div> | </div> | ||
</div> | </div> | ||
| + | |||
| + | ==Screenshots== | ||
| + | [[File:Pet_brain_segmentation.png|800px|PET Brain Segmentation]] | ||
| + | [[File:Pet_liver_reference_region.png|800px|PET Liver Reference Region Segmentation]] | ||
Latest revision as of 23:41, 8 January 2015
Home < Whole Body PET < CT Reference Region segmentation
Key Investigators
Christian Bauer (University of Iowa)
Project Description
- C. Bauer et al. (2012): Automated Measurement of Uptake in Cerebellum, Liver, and Aortic Arch in Full-body FDG PET/CT Scans
- http://scitation.aip.org/content/aapm/journal/medphys/39/6/10.1118/1.4711815
Objective
- Create slicer Slicer CLIs to identify liver, aortic arch and cerebellum regions in whole body FDG-18 PET/CT scans
Approach, Plan
- Consolidate current source code
- Wrap into Slicer CLI
- internally brain segmentation required
- Start with liver region
- Add aortic arch region
- Add cerebellum region
Progress
- Implemented Slicer CLI for segmentation of brain
- Implemented Slicer CLI for segmentation of liver reference region
Screenshots
