Difference between revisions of "2016 Winter Project Week/Projects/BRAINSFit in MeVisLab"
From NAMIC Wiki
Hans.meine (talk | contribs) |
Hans.meine (talk | contribs) |
||
(11 intermediate revisions by 3 users not shown) | |||
Line 2: | Line 2: | ||
<gallery> | <gallery> | ||
Image:PW-Summer2015.png|[[2015_Summer_Project_Week#Projects|Projects List]] | Image:PW-Summer2015.png|[[2015_Summer_Project_Week#Projects|Projects List]] | ||
+ | Image:CLI_BrainsFIT_in_MeVisLab.png|Screenshot of CLI_BrainsFIT module panel in MeVisLab | ||
</gallery> | </gallery> | ||
Line 7: | Line 8: | ||
* Hans Meine | * Hans Meine | ||
* Steve Pieper | * Steve Pieper | ||
+ | * Adam Rankin (observer) | ||
==Project Description== | ==Project Description== | ||
− | + | {| class="wikitable" | |
− | + | ! style="text-align: left; width:27%" | Objective | |
− | < | + | ! style="text-align: left; width:27%" | Approach and Plan |
+ | ! style="text-align: left; width:27%" | Progress and Next Steps | ||
+ | |- style="vertical-align:top;" | ||
+ | | | ||
+ | <!-- Objective bullet points --> | ||
* Perform interoperability tests with "interesting" CLI modules in MeVisLab | * Perform interoperability tests with "interesting" CLI modules in MeVisLab | ||
* Leverage Siemens' Syngo.Frontier platform for integrating CLI modules | * Leverage Siemens' Syngo.Frontier platform for integrating CLI modules | ||
− | + | | | |
− | |||
− | |||
* Potentially interesting CLIs discussed so far: | * Potentially interesting CLIs discussed so far: | ||
** BrainsFIT | ** BrainsFIT | ||
** CIP (Chest Imaging Platform) | ** CIP (Chest Imaging Platform) | ||
** UKFTractography | ** UKFTractography | ||
− | * Identify and address potential blockers for using these CLIs in MeVisLab/Frontier | + | * Identify and address potential blockers for using these CLIs in MeVisLab/[http://www.healthcare.siemens.de/computed-tomography/clinical-imaging-solutions/syngo-via-frontier Frontier] |
* Design a small demo GUI / visualization | * Design a small demo GUI / visualization | ||
− | + | * Also check interoperability with fiducial support (cf. Nicole's [[2015_Summer_Project_Week:Return_Fiducials_from_CLIs | recent coordinate system fixes]]) | |
− | + | | | |
− | + | * pointfile support added to [https://github.com/commontk/ctk-cli ctk-cli] | |
− | + | * ctk-cli properly moved to MeVisLab's ThirdParty repository | |
− | + | * [https://github.com/commontk/CTK/issues/622 Issue filed] about pointfile addition to spec / XSD | |
− | + | * got simple network with CIP's CLI modules running in MeVisLab | |
+ | ** no fatal issues | ||
+ | ** only one seed point can be passed to lesion segmentation | ||
+ | |} | ||
+ | |||
+ | ==Background and References== | ||
* Demo of CLI modules in MeVisLab: https://www.youtube.com/watch?v=FSCrmiWEcbA | * Demo of CLI modules in MeVisLab: https://www.youtube.com/watch?v=FSCrmiWEcbA | ||
− | * Previous Project Week project from 2013: | + | * Previous Project Week project from 2013: [[2013_Summer_Project_Week:CLI_modules_in_MeVisLab|CLI modules in MeVisLab]] |
+ | * Link to additional planning documents (only accessible with account): https://collab.mevis.fraunhofer.de/display/CLIFD/CLI-Frontier+Demo+Home |
Latest revision as of 22:49, 6 January 2016
Home < 2016 Winter Project Week < Projects < BRAINSFit in MeVisLabKey Investigators
- Hans Meine
- Steve Pieper
- Adam Rankin (observer)
Project Description
Objective | Approach and Plan | Progress and Next Steps |
---|---|---|
|
|
|
Background and References
- Demo of CLI modules in MeVisLab: https://www.youtube.com/watch?v=FSCrmiWEcbA
- Previous Project Week project from 2013: CLI modules in MeVisLab
- Link to additional planning documents (only accessible with account): https://collab.mevis.fraunhofer.de/display/CLIFD/CLI-Frontier+Demo+Home