Difference between revisions of "2016 Winter Project Week/Projects/Interactive4DSegmentation"
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Image:PW-MIT2016.png|link=2016_Winter_Project_Week#Projects|[[2016_Winter_Project_Week#Projects|Projects List]] | Image:PW-MIT2016.png|link=2016_Winter_Project_Week#Projects|[[2016_Winter_Project_Week#Projects|Projects List]] | ||
| + | Image:Interactive4DSegmentation.png|concept | ||
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<!-- Objective bullet points --> | <!-- Objective bullet points --> | ||
* Create a Slicer extension to support interactive 4-D segmentation. | * Create a Slicer extension to support interactive 4-D segmentation. | ||
| − | * Load and view longitudinal and multi-modal image data. | + | * '''Load and view longitudinal and multi-modal image data.''' |
| − | * Incorporate registration information in image views. | + | * '''Incorporate registration information in image views.''' |
* (if time) Maximize real estate for image views, possibly allowing for dual-screen views | * (if time) Maximize real estate for image views, possibly allowing for dual-screen views | ||
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<!-- Add a bulleted list of key points --> | <!-- Add a bulleted list of key points --> | ||
* Design module with custom view layout that is intuitive for 4-D segmentation of objects imaged in multiple volumes. | * Design module with custom view layout that is intuitive for 4-D segmentation of objects imaged in multiple volumes. | ||
| − | * Incorporate current Editor Effects into module | + | * '''Incorporate current Editor Effects into module''' |
* Investigate how to show cursor on all views, taking into account registration information | * Investigate how to show cursor on all views, taking into account registration information | ||
* Develop simple way to load and view data (MRML or MRB). | * Develop simple way to load and view data (MRML or MRB). | ||
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<!-- Fill this out at the end of Project Week; describe what you did this week and what you plan to do next --> | <!-- Fill this out at the end of Project Week; describe what you did this week and what you plan to do next --> | ||
| − | * [https://github.com/ejulrich/Slicer-Interactive4DSegmentation github repo] | + | * [https://github.com/ejulrich/Slicer-Interactive4DSegmentation github repo] (will likely change) |
| − | * Next Steps: | + | * Spoke with Andras Lasso about Slicer Sequences |
| − | ** investigate data | + | ** work great for handling multiple images/transforms/labels |
| − | ** | + | ** spent time learning about Sequence nodes |
| + | * '''Next Steps:''' | ||
| + | ** investigate preprocessing data as Sequence | ||
| + | ** continue learning from mpReview module about annotating multi-modal data | ||
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==Background and References== | ==Background and References== | ||
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | <!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | ||
| − | * [ | + | * [https://www.slicer.org/wiki/Documentation/Nightly/Extensions/mpReview Multiparametric Image Review] |
| + | *[https://github.com/SlicerRt/Sequences Sequences] | ||
Latest revision as of 17:37, 10 July 2017
Home < 2016 Winter Project Week < Projects < Interactive4DSegmentation
concept
Key Investigators
- Ethan Ulrich (University of Iowa)
- Andrey Fedorov, BWH
Project Description
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