Difference between revisions of "2016 Summer Project Week/SliceTracker"
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* Use SliceTracker currently used in shadow mode + collecting feedback from Kemal about usability | * Use SliceTracker currently used in shadow mode + collecting feedback from Kemal about usability | ||
** At least 5 cases in a row which has to run without having any issues, then production use | ** At least 5 cases in a row which has to run without having any issues, then production use | ||
| − | * Integration of Z-Frame registration | + | * Integration of [https://github.com/SlicerProstate/SliceTracker/tree/master/ZFrameCalibration Z-Frame registration] |
* Calculation of template hole and depth to apply for reaching targets | * Calculation of template hole and depth to apply for reaching targets | ||
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<!-- Progress and Next steps bullet points (fill out at the end of project week) --> | <!-- Progress and Next steps bullet points (fill out at the end of project week) --> | ||
| − | + | * Discussions about implementing SliceTracker as a Slicelet (this will prevent users from making mistakes/pushing wrong buttons etc.) | |
| + | * Next Steps: | ||
| + | ** Will soon run in production mode replacing the "old" Slicer 3 cart | ||
| + | ** As soon as it is in its final state: create extension | ||
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==Background and References== | ==Background and References== | ||
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | <!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data --> | ||
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| + | [[File:Slicetracker.gif]] | ||
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SliceTracker code: https://github.com/SlicerProstate/SliceTracker | SliceTracker code: https://github.com/SlicerProstate/SliceTracker | ||
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| + | Previous project week resources: | ||
| + | * Winter 2015: http://www.na-mic.org/Wiki/index.php/ProstateNavigation_workflow | ||
| + | * Summer 2015: http://www.na-mic.org/Wiki/index.php/2015_Refinement_Registration_Module | ||
| + | * Winter 2016: http://www.na-mic.org/Wiki/index.php/2016_Winter_Project_Week/Projects/SliceTracker | ||
Latest revision as of 15:52, 25 June 2016
Home < 2016 Summer Project Week < SliceTrackerKey Investigators
- Christian Herz (BWH)
- Peter Behringer (Basler AG)
- Andriy Fedorov (BWH)
Project Description
Slicetracker is a Slicer extension which focuses on tracking the prostate during MR-guided prostate biopsies. It combines registration of the prostate in pre-procedural and intra-procedural images which improves the chance to find the exact same target position in intra-procedural images.
Furthermore a so called z-Frame registration is included for correlating the patient and 3D Slicers coordinate system. For guidance of the needle a template grid with 15x14 holes is placed in front of the z-Frame. The optimal hole is computed for inserting the needle and obtaining the tissue sample.
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Background and References
SliceTracker code: https://github.com/SlicerProstate/SliceTracker
Previous project week resources:
