Difference between revisions of "SDIWG:Meeting Minutes 20071116"
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**The biositemaps [[Media:Biositemaps-white-paper-v2.2.doc | white paper]] presents description of prototype for distributed architecture to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining software tools and information resources on the Internet. Each site which intends to contribute to the inventory instantiates a file on its Internet site ‘biositemap.xml’ which conforms to a defined schema and is tagged by a resource ontology. The prototype schema may be found at http://www.ncbcs.org/biositemaps/biositemaps-v04.xsd A good reference for XML editors is at http://en.wikipedia.org/wiki/Xml_editor e.g., we are using XMLmind. The prototype resource ontology may be found at http://bioontology.org/projects/ontologies/SoftwareOntology/ | **The biositemaps [[Media:Biositemaps-white-paper-v2.2.doc | white paper]] presents description of prototype for distributed architecture to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining software tools and information resources on the Internet. Each site which intends to contribute to the inventory instantiates a file on its Internet site ‘biositemap.xml’ which conforms to a defined schema and is tagged by a resource ontology. The prototype schema may be found at http://www.ncbcs.org/biositemaps/biositemaps-v04.xsd A good reference for XML editors is at http://en.wikipedia.org/wiki/Xml_editor e.g., we are using XMLmind. The prototype resource ontology may be found at http://bioontology.org/projects/ontologies/SoftwareOntology/ | ||
**Further postings will be made at the NCBC portal at http://www.ncbcs.org/biositemaps/ | **Further postings will be made at the NCBC portal at http://www.ncbcs.org/biositemaps/ | ||
| − | **TBD: Converge on contents of schema and resource ontology with appropriate parties. | + | **TBD: Long-term plan for maintenance of schema and resource ontology (hosting, versioning, ownership,...). Converge on contents of schema and resource ontology with appropriate parties. This will amount to a v1.0 release (i.e., figure out where to stop now and leave extensions to a later date). Resolve issues of locating the biositemaps content (hard-wired, crawl,...) |
**Status of the NCBC iTools, which is uses the biositemaps. http://www.loni.ucla.edu/iToolssvc/ncbc_iTools.html | **Status of the NCBC iTools, which is uses the biositemaps. http://www.loni.ucla.edu/iToolssvc/ncbc_iTools.html | ||
Revision as of 23:36, 15 November 2007
Home < SDIWG:Meeting Minutes 20071116Agenda: NCBC Joint Working Group Meeting
Contents
Notes
Friday, November 16, 2007: 2:30 -- 3:30 PM EST
Please contact Peter Lyster for information Peter Lyster
SDIWG Meetings Page
Save the date for the next SDWIG tcon/Connect, three months from now: Friday February 22, 2008
TCon Agenda
- Roll Call/Note-taker (Ivo Dinov) (5 min)
- Minutes from most recent SDIWG tcon Sept 21, 2007 (5 min)
- NCBC All Hand Meeting, 2008. Planning & Brainstorm discussion (Peter, Karin, All)
- Status check on two working groups: Biositemaps Resourceome, Scientific Ontologies, NCBC Driving Biological Projects Interactions and Impact
- NCBC Consortium authorship policies (Peter; Open Discussion with output a list of bullet ideas)
- CTSA Informatics Meeting in Chicago at AMIA (Brian, David, any others
present)
- Discuss AMIA/ISCB translational informatics summit in March
- Discussion of Biositemaps white paper and of authorship (see more details in 'Appendix' below).
- Next 2 meeting dates set
- Questions/Information Sharing
Appendix: Biositemaps white paper
- Biositemaps Resourceome (Ivo Dinov, Daniel Rubin, Will Schroeder, Beth Kirschner, Karen Skinner, Zohara Cohen, Bill Bug, Peter Lyster)
- The biositemaps white paper presents description of prototype for distributed architecture to address (i) locating, (ii) querying, (iii) composing or combining, and (iv) mining software tools and information resources on the Internet. Each site which intends to contribute to the inventory instantiates a file on its Internet site ‘biositemap.xml’ which conforms to a defined schema and is tagged by a resource ontology. The prototype schema may be found at http://www.ncbcs.org/biositemaps/biositemaps-v04.xsd A good reference for XML editors is at http://en.wikipedia.org/wiki/Xml_editor e.g., we are using XMLmind. The prototype resource ontology may be found at http://bioontology.org/projects/ontologies/SoftwareOntology/
- Further postings will be made at the NCBC portal at http://www.ncbcs.org/biositemaps/
- TBD: Long-term plan for maintenance of schema and resource ontology (hosting, versioning, ownership,...). Converge on contents of schema and resource ontology with appropriate parties. This will amount to a v1.0 release (i.e., figure out where to stop now and leave extensions to a later date). Resolve issues of locating the biositemaps content (hard-wired, crawl,...)
- Status of the NCBC iTools, which is uses the biositemaps. http://www.loni.ucla.edu/iToolssvc/ncbc_iTools.html
Minutes
Note taker: (Ivo Dinov) [Suggested order of note takers for future meetings: Dinov (this one); Chueh; Sherman; Schroeder; Floratos; Rubin; Jags]
- Review of Sept 21, 2007 Minutes
- Attendees:
