Difference between revisions of "2008 Winter Project Week Tractography"

Revision as of 17:52, 18 December 2007

Home < 2008 Winter Project Week Tractography

- 9:00am: Guido Gerig, Overview of Project goals and progress to date tractography methods see this page for background
- 9:15 Sonia Pujol (BWH) Streamline Tractography in Slicer2.7 using ROI and Whole Brain Seeding
- 9:30 Sylvain Gouttard (Utah) FiberViewer
- 9:45 Tri Ngo (MIT/BWH) Stochastic Tractography
- 10:00 John Melonakos (Georgia Tech) Geodesic Tractography Segmentation
- 10:15 Vince Magnotta (UIowa) GTract
10:30am: coffee break
- 11:00 Ross Whitaker/Tom Fletcher (Utah) Volumetric Connectivity
- 11:15 Casey Goodlett (Utah) DTI Atlas
- 11:30 Sonia Pujol (BWH) Cross algorithm summary statistics
12:15pm: lunch
- 1:30- 3:00

Ross Whitaker to kick-off discussion of Tractography results with summarizing ideas & focus on next steps

- - Data formats and coordinate system requirements/guidelines/recommendations
  - Quality control methods and implementation
  - ROIs: what works, what doesn't, what to do?
  - registration &/or resampling to support visit 1- visit 2 analysis and group analysis
  - Freesurfer to B0 transform for white matter mask
  - quantification of registration error and its propagation forward and impact on final results
  - plans for data sharing curation and timeline (integration with XNAT project)
  - outcome metrics and how to best frame scientific questions for this project
3pm: coffee break
- 3:15 Dan Marcus to lead discussion of effort required to post this dataset and results on XNAT Central or XNAT NAMIC or what?
- 4:00 Guido to lead discussion of "NAMIC software infrastructure for DWI analysis" to clarify what the community expects from a powerful NAMIC DWI Analysis toolkit and identify areas of high priority development

@@ Line 10: / Line 10: @@
 **11:30  Sonia Pujol (BWH)  Cross algorithm summary statistics
 *12:15pm: lunch
-**1:30- 3:00 Ross Whitaker to kick-off discussion of Tractography results with summarizing ideas & focus on next steps
+**1:30- 3:00
+Ross Whitaker to kick-off discussion of Tractography results with summarizing ideas & focus on next steps
+***Data formats and coordinate system requirements/guidelines/recommendations
+***Quality control methods and implementation
+***ROIs: what works, what doesn't, what to do?
+***registration &/or resampling to support visit 1- visit 2 analysis and group analysis
+***Freesurfer to B0 transform for white matter mask
+***quantification of registration error and its propagation forward and impact on final results
+***plans for data sharing curation and timeline (integration with XNAT project)
+*** outcome metrics and how to best frame scientific questions for this project
 *3pm: coffee break
-**3:15  Dan Marcus to lead discussion of effort required to post this dataset and results on XNAT Central or XNAT NAMIC or ?
+**3:15  Dan Marcus to lead discussion of effort required to post this dataset and results on XNAT Central or XNAT NAMIC or what?
 **4:00  Guido to lead discussion of "NAMIC software infrastructure for DWI analysis" to clarify what the community expects from a powerful NAMIC DWI Analysis toolkit and identify areas of high priority development
 Back to [[AHM_2008]], [[Events]]