Difference between revisions of "2008 Winter Project Week Tractography Meeting Notes"

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* Shortest path, volumetric connectivity  (Tom)
 
* Shortest path, volumetric connectivity  (Tom)
  
==Review and define metrics to compare results==
+
==Review and define metrics to compare results, which methods to compare?==
 
Current metrics: tensor invariants (FA, trace, mode, norm), volume, length.
 
Current metrics: tensor invariants (FA, trace, mode, norm), volume, length.
  
 
* 12 different tracts
 
* 12 different tracts
 
* Tracts voxelized
 
* Tracts voxelized
* Missing parts of a tract
+
* Missing parts of a tract, how should be penalized?
 
* Statistics along the tracts, should we sum along the tract to get one measure?
 
* Statistics along the tracts, should we sum along the tract to get one measure?
 
* Distributions across the tract
 
* Distributions across the tract

Revision as of 17:06, 9 January 2008

Home < 2008 Winter Project Week Tractography Meeting Notes

Data quality, NAMIC DTI pipeline

ROI definitions and impact on different methods

  • Streamline Slicer2 (Sonia)
  • Streamline Fiberviewer (Casey)
  • Stochastic Slicer3 (Tri)
  • Shortest path (John)
  • Shortest path, volumetric connectivity (Tom)

Review and define metrics to compare results, which methods to compare?

Current metrics: tensor invariants (FA, trace, mode, norm), volume, length.

  • 12 different tracts
  • Tracts voxelized
  • Missing parts of a tract, how should be penalized?
  • Statistics along the tracts, should we sum along the tract to get one measure?
  • Distributions across the tract