Difference between revisions of "2008 Engineering review at Utah"
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'''Discussion of the 3 major Utah projects DTI Analysis, Shape Analysis, Segmentation including Pathology''' | '''Discussion of the 3 major Utah projects DTI Analysis, Shape Analysis, Segmentation including Pathology''' | ||
| + | |||
| + | '''Draft Schedule''' | ||
| + | * Monday 24 | ||
| + | |||
| + | ** 12pm to 1.30pm: Lunch / Possibility to attend SCI distinguished lecture by Andy van Dam titled ''When is the Pen Mightier Than the Keyboard?'' [http://www.sci.utah.edu/cgi-bin/ALLseminars.pl?display=2008032400] | ||
| + | |||
| + | * Tuesday 25 | ||
| + | ** Noon to 1.30pm: Lunch / SCI presentation by Will Schroeder | ||
| + | |||
| + | * Wednesday 26 | ||
* ''DTI processing modules/pipeline'' | * ''DTI processing modules/pipeline'' | ||
Revision as of 17:01, 21 March 2008
Home < 2008 Engineering review at UtahThe date is now set at: March 24-26, 2008. Begin: Morning of Monday, March 24. End: Noon on Wednesday, March 26.
Suggested Hotel: Hotel Monaco.
Engineering Attendees: Jim Miller, Xiaodong Tao, Steve Pieper, Will Schroeder, Marco Ruiz (Full list of attendees in the end of page)
- Slicer3 Plugins Presentation [ppt]
Proposed discussion items:
Discussion of the 3 major Utah projects DTI Analysis, Shape Analysis, Segmentation including Pathology
Draft Schedule
- Monday 24
- 12pm to 1.30pm: Lunch / Possibility to attend SCI distinguished lecture by Andy van Dam titled When is the Pen Mightier Than the Keyboard? [1]
- Tuesday 25
- Noon to 1.30pm: Lunch / SCI presentation by Will Schroeder
- Wednesday 26
- DTI processing modules/pipeline
- Infrastructure for DWI/DTI data types
- How to handle coordinate frames
- Preprocessing pipeline for DWI->DTI->analysis
- Filtering
- Registration
- Estimation
- White mater mask
- User interfaces/interaction
- Analysis of DTI data
- Tractography
- Atlases
- Derived quantities
- Hypothesis testing
- Infrastructure for DWI/DTI data types
- Shape analysis pipeline
- How to organize data
- How to break pipeline in to steps
- Segmentation, preprocessing, parameterization, visualization
- How to accommodate new modules/techniques
- The general problem of registration and atlases
- Status of spline-based methods
- Intertability
- How to incorporate registration/atlases/atlas building in to slicer3
- General architecture issues
- How to provide coherent user interfaces for specific tasks
- Pipelines for specific data or analyses
- E.g. see Siemens workstation software with modules/pages
- Command-line vs built in modules
- Policies for supporting one versus the other
- How to provide coherent user interfaces for specific tasks
- Attendees
- Ross Whitaker
- Tom Fletcher
- Josh Cates
- Guido Gerig
- Marcel Prastawa
- Sylvain Gouttard
- Casey Goodlett
- C-F Westin
- Will Schroeder
- Steve Pieper
- Jim Miller
- Xiaodong Tao
- Marco Ruiz
